TissueCFM001366's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| phytol salvage pathway | 0.000354636 | plantCyc |
| phytol kinase activity | 0.004048762 | GO:0010276 |
| tRNA methyltransferase activity | 0.005059831 | GO:0008175 |
| rRNA methyltransferase activity | 0.005395957 | GO:0008649 |
| vitamin E biosynthetic process | 0.008364078 | GO:0010189 |
| rRNA base methylation | 0.008364078 | GO:0070475 |
| tRNA methylation | 0.008364078 | GO:0030488 |
| iron-sulfur cluster binding | 0.011622144 | GO:0051536 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000067 | - | - |
| CRO_T004297 | AT5G04490 (2.00E-70) | VTE5|vitamin E pathway gene 5 |
| CRO_T007170 | AT1G60230 (2.00E-144) | Radical SAM superfamily protein |
| CRO_T016778 | AT2G38610 (1.00E-130) | RNA-binding KH domain-containing protein |
| CRO_T026084 | AT1G23560 (1.00E-77) | Domain of unknown function (DUF220) |
| CRO_T030055 | AT1G28220 (7.00E-55) | ATPUP3|purine permease 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000361 | jasmonic acid biosynthesis aromatase activity Transcription_related, Transcription regulator: mTERF | details |
| TissueCFM000895 | L-serine biosynthesis photorespiration oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor NAD binding | details |
Expression profiles
 Show details about module gene expression profiling |