TissueCFM001471's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| photosynthesis light reactions | 0.005131975 | plantCyc |
| Sulfur metabolism | 0.009033204 | KEGG pathway |
| carbohydrate transport | 0.030168018 | GO:0008643 |
| plant-type vacuole membrane | 0.033875656 | GO:0009705 |
| respiratory chain | 0.033875656 | GO:0070469 |
| substrate-specific transmembrane transporter activity | 0.044262698 | GO:0022891 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000544 | AT4G10040 (4.00E-55) | CYTC-2|cytochrome c-2 |
| CRO_T003579 | AT3G58030 (3.00E-84) | RING/U-box superfamily protein |
| CRO_T005878 | AT2G20780 (2.00E-16) | Major facilitator superfamily protein |
| CRO_T020351 | AT3G19770 (1.00E-69) | ATVPS9A|VACUOLAR PROTEIN SORTING 9A |
| CRO_T025218 | - | - |
| CRO_T028113 | AT1G70640 (8.00E-25) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000124 | NF-kappa B signaling pathway Protein_kinases_phosphatases, PPC:1.5.2: LRK10 Like Kinase (Type 1) Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase pyruvate fermentation to lactate vindoline and vinblastine biosynthesis | details |
| TissueCFM000188 | details | |
| TissueCFM001729 | phosphatidic acid transporter activity cell wall repair phospholipid transport mitochondrial intermembrane space mitochondrial proton-transporting ATP synthase complex cobalt ion binding zinc ion binding pollen development root development defense response to fungus defense response to bacterium copper ion binding Protein processing in endoplasmic reticulum | details |
| TissueCFM001841 | UDP-D-xylose biosynthesis vacuolar membrane regulation of plant-type hypersensitive response interstrand cross-link repair hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides UDP-glucuronate decarboxylase activity nuclease activity proteasome core complex threonine-type endopeptidase activity Fanconi anemia pathway Proteasome Amino sugar and nucleotide sugar metabolism nucleic acid phosphodiester bond hydrolysis proteolysis involved in cellular protein catabolic process S-adenosylmethionine-dependent methyltransferase activity | details |
Expression profiles
 Show details about module gene expression profiling |