TissueCFM001531's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP85A | 0.000886394 | CYP450 family |
| brassinosteroid biosynthesis I | 0.002834156 | plantCyc |
| Brassinosteroid biosynthesis | 0.003364814 | KEGG pathway |
| 5'-3' exodeoxyribonuclease activity | 0.004514311 | GO:0035312 |
| L-histidine transmembrane transporter activity | 0.004514311 | GO:0005290 |
| arginine transmembrane transporter activity | 0.004514311 | GO:0015181 |
| nuclear chromosome, telomeric region | 0.004785112 | GO:0000784 |
| L-lysine transmembrane transporter activity | 0.005642055 | GO:0015189 |
| interstrand cross-link repair | 0.005888961 | GO:0036297 |
| arginine transmembrane transport | 0.005888961 | GO:1903826 |
| protection from non-homologous end joining at telomere | 0.005888961 | GO:0031848 |
| L-histidine transmembrane transport | 0.005888961 | GO:0089709 |
| L-lysine transmembrane transport | 0.005888961 | GO:1903401 |
| double-strand break repair via nonhomologous end joining | 0.008830831 | GO:0006303 |
| damaged DNA binding | 0.021635096 | GO:0003684 |
| brassinosteroid homeostasis | 0.022199569 | GO:0010268 |
| brassinosteroid biosynthetic process | 0.022199569 | GO:0016132 |
| sterol metabolic process | 0.022199569 | GO:0016125 |
| multicellular organism development | 0.032269857 | GO:0007275 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004365 | AT1G14140 (5.00E-10) | UCP3|Uncoupling Protein 3 |
| CRO_T012619 | AT1G27410 (7.00E-119) | DNA repair metallo-beta-lactamase family protein |
| CRO_T021507 | AT3G59670 (1.00E-43) | unknown protein |
| CRO_T025407 | AT4G19230 (3.00E-63) | CYP707A1|cytochrome P450, family 707, subfamily A, polypeptide 1 |
| CRO_T026739 | AT4G28430 (1.00E-75) | Reticulon family protein |
| CRO_T033132 | AT1G54385 (4.00E-150) | ARM repeat superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001016 | nucleobase-containing compound biosynthetic process Pyrimidine metabolism Viral carcinogenesis farnesylcysteine salvage pathway pyrimidine deoxyribonucleosides salvage phosphate-containing compound metabolic process nucleosome assembly geraniol and geranial biosynthesis detoxification of reactive carbonyls in chloroplasts traumatin and (Z)-3-hexen-1-yl acetate biosynthesis phosphatidylcholine acyl editing phospholipases very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II response to water deprivation | details |
| TissueCFM001030 | Endocytosis Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) phosphoprotein phosphatase activity ubiquitin protein ligase binding GTPase activator activity positive regulation of GTPase activity dephosphorylation | details |
| TissueCFM001536 | Cytochrome_P450, Cytochrome P450: CYP85A brassinosteroid biosynthesis I pyrimidine deoxyribonucleosides salvage rRNA (cytosine-N4-)-methyltransferase activity nucleobase-containing compound biosynthetic process Brassinosteroid biosynthesis Pyrimidine metabolism phosphate-containing compound metabolic process rRNA base methylation brassinosteroid homeostasis sterol metabolic process brassinosteroid biosynthetic process multicellular organism development | details |
| TissueCFM001730 | intrinsic component of membrane Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) single-organism developmental process protein catabolic process aspartic-type endopeptidase activity ubiquitin protein ligase binding | details |
Expression profiles
 Show details about module gene expression profiling |