TissueCFM001582's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase activity | 0.002127502 | GO:0008441 |
| Sulfur metabolism | 0.003011068 | KEGG pathway |
| D-myo-inositol (1,4,5)-trisphosphate degradation | 0.003187954 | plantCyc |
| mitochondrial fission | 0.003900421 | GO:0000266 |
| phosphate-containing compound metabolic process | 0.00633397 | GO:0006796 |
| mitochondrial outer membrane | 0.014767773 | GO:0005741 |
| magnesium ion binding | 0.026405845 | GO:0000287 |
| response to oxidative stress | 0.030350829 | GO:0006979 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002960 | AT3G09730 (9.00E-39) | unknown protein |
| CRO_T009694 | AT5G10650 (3.00E-20) | RING/U-box superfamily protein |
| CRO_T017003 | AT3G18800 (7.00E-60) | unknown protein |
| CRO_T017343 | AT5G63980 (2.00E-33) | ALX8|ALTERED EXPRESSION OF APX2 8; FRY1|FIERY1; HOS2|HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2; RON1|ROTUNDA 1; SUPO1|suppressors of PIN1 overexpression 1 |
| CRO_T017784 | AT4G01037 (3.00E-43) | WTF1|what's this factor? |
| CRO_T018382 | AT5G22350 (8.00E-121) | ELM1|ELONGATED MITOCHONDRIA 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000883 | detoxification of nitrogen compound cyanide catabolic process meiosis I 3-cyanoalanine hydratase activity cyanoalanine nitrilase activity cyanide detoxification I L-asparagine degradation I Meiosis - yeast pyruvate decarboxylation to acetyl CoA superpathway of aspartate and asparagine biosynthesis chromosome organization Cyanoamino acid metabolism Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family Transcription_related, Transcription factor: RWP-RK DNA metabolic process | details |
| TissueCFM001583 | glutamate N-acetyltransferase activity acetyl-CoA:L-glutamate N-acetyltransferase activity 3'(2'),5'-bisphosphate nucleotidase activity D-myo-inositol (1,4,5)-trisphosphate degradation L-arginine biosynthesis II (acetyl cycle) L-ornithine biosynthesis I Sulfur metabolism ornithine biosynthetic process 2-Oxocarboxylic acid metabolism phosphate-containing compound metabolic process arginine biosynthetic process glucose transmembrane transport glucose import proton transport glucose transmembrane transporter activity sugar:proton symporter activity 2-alkenal reductase [NAD(P)] activity magnesium ion binding | details |
| TissueCFM001584 | plasma membrane Riboflavin metabolism Sulfur metabolism D-myo-inositol (1,4,5)-trisphosphate degradation flavin biosynthesis I (bacteria and plants) 3'(2'),5'-bisphosphate nucleotidase activity chloroplast accumulation movement phosphate-containing compound metabolic process chloroplast avoidance movement glucose transmembrane transport glucose import proton transport glucose transmembrane transporter activity sugar:proton symporter activity | details |
| TissueCFM001757 | intrinsic component of membrane Sulfur metabolism 3'(2'),5'-bisphosphate nucleotidase activity cytoplasm D-myo-inositol (1,4,5)-trisphosphate degradation farnesylcysteine salvage pathway geraniol and geranial biosynthesis detoxification of reactive carbonyls in chloroplasts traumatin and (Z)-3-hexen-1-yl acetate biosynthesis cellular transition metal ion homeostasis phosphate-containing compound metabolic process protein catabolic process metal ion transport benzoate biosynthesis I (CoA-dependent, β-oxidative) very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II transition metal ion binding aspartic-type endopeptidase activity | details |
| TissueCFM001760 | nucleotide phosphorylation adenylate kinase activity pyruvate decarboxylation to acetyl CoA adenosine ribonucleotides de novo biosynthesis | details |
| TissueCFM001793 | cyanoalanine nitrilase activity 3-cyanoalanine hydratase activity detoxification of nitrogen compound cyanide catabolic process 3'(2'),5'-bisphosphate nucleotidase activity cyanide detoxification I L-asparagine degradation I phosphate-containing compound metabolic process cytokinesis by cell plate formation cell division site D-myo-inositol (1,4,5)-trisphosphate degradation superpathway of aspartate and asparagine biosynthesis Cyanoamino acid metabolism Sulfur metabolism cell plate nuclear envelope plasma membrane magnesium ion binding RNA transport | details |
Expression profiles
 Show details about module gene expression profiling |