TissueCFM001636's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription regulator: GNAT | 0.004602101 | TF family |
| N-terminal protein amino acid acetylation | 0.012126559 | GO:0006474 |
| negative regulation of translation | 0.012126559 | GO:0017148 |
| nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 0.012126559 | GO:0000288 |
| iron-sulfur cluster assembly | 0.012126559 | GO:0016226 |
| CCR4-NOT core complex | 0.012142698 | GO:0030015 |
| RNA degradation | 0.013051924 | KEGG pathway |
| N-acetyltransferase activity | 0.01919385 | GO:0008080 |
| cytoplasmic mRNA processing body | 0.021226183 | GO:0000932 |
| 4 iron, 4 sulfur cluster binding | 0.032407589 | GO:0051539 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003117 | AT1G29370 (1.00E-137) | Kinase-related protein of unknown function (DUF1296) |
| CRO_T009534 | AT3G22560 (1.00E-45) | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| CRO_T020186 | AT1G07705 (0) | NOT2a|Negative on TATA less2a |
| CRO_T024026 | AT4G34660 (2.00E-129) | SH3 domain-containing protein |
| CRO_T030106 | AT3G32940 (7.00E-59) | RNA-binding KH domain-containing protein |
| CRO_T032301 | AT5G50960 (4.00E-164) | ATNBP35|NUCLEOTIDE BINDING PROTEIN 35 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001575 | Transcription_related, Transcription regulator: GNAT nuclease activity N-acetyltransferase activity N-terminal protein amino acid acetylation Base excision repair mRNA surveillance pathway cellular process | details |
| TissueCFM001635 | iron-sulfur cluster assembly negative regulation of apoptotic process mitochondrial intermembrane space Transcription_related, Transcription factor: FAR1 | details |
| TissueCFM001722 | bundle sheath cell fate specification diacylglycerol and triacylglycerol biosynthesis N-Glycan biosynthesis Transcription_related, Transcription regulator: GNAT leaf development N-terminal protein amino acid acetylation Transcription_related, Transcription factor: GRAS N-acetyltransferase activity | details |
| TissueCFM001727 | Influenza A diacylglycerol and triacylglycerol biosynthesis N-Glycan biosynthesis cellular oxidant detoxification peroxidase activity | details |
| TissueCFM001763 | N-acetyltransferase activity N-terminal protein amino acid acetylation U5 snRNP Transcription_related, Transcription regulator: GNAT Transcription_related, Transcription regulator: Jumonji mRNA surveillance pathway formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |