TissueCFM001763's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| N-acetyltransferase activity | 0.002303262 | GO:0008080 |
| N-terminal protein amino acid acetylation | 0.003541648 | GO:0006474 |
| U5 snRNP | 0.006378735 | GO:0005682 |
| Transcription_related, Transcription regulator: GNAT | 0.012655779 | TF family |
| Transcription_related, Transcription regulator: Jumonji | 0.012655779 | TF family |
| mRNA surveillance pathway | 0.014804758 | KEGG pathway |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.023928528 | cazy family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002040 | AT1G53040 (2.00E-164) | Protein of unknown function (DUF616) |
| CRO_T006093 | AT1G27595 (6.00E-99) | |
| CRO_T009534 | AT3G22560 (1.00E-45) | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| CRO_T018529 | AT1G63490 (3.00E-53) | transcription factor jumonji (jmjC) domain-containing protein |
| CRO_T022037 | AT5G09390 (1.00E-68) | CD2-binding protein-related |
| CRO_T024341 | AT2G38630 (0) | Transducin/WD40 repeat-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001184 | Hedgehog signaling pathway Transcription_related, Transcription regulator: TRAF Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3-box ABC transporters Transcription_related, Transcription factor: MYB-related mRNA surveillance pathway Ubiquitin_Proteasome_system, E3 adaptor: BTB formation of glycosidic bonds, GlycosylTransferases: GTnc microtubule-based movement S-adenosylmethionine-dependent methyltransferase activity microtubule motor activity ATPase activity ATPase activity, coupled to transmembrane movement of substances transferase activity, transferring glycosyl groups microtubule binding | details |
| TissueCFM001185 | protein import into mitochondrial intermembrane space mitochondrial protein processing mitochondrial fusion protein complex assembly cristae formation Hedgehog signaling pathway Transcription_related, Transcription regulator: TRAF Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3-box cell division ABC transporters Transcription_related, Transcription factor: MYB-related Ubiquitin_Proteasome_system, E3 adaptor: BTB formation of glycosidic bonds, GlycosylTransferases: GTnc mRNA surveillance pathway | details |
| TissueCFM001401 | Protein_kinases_phosphatases, PPC:4.5.8: Unknown Function Kinase formation of glycosidic bonds, GlycosylTransferases: GTnc phragmoplast spindle | details |
| TissueCFM001575 | Transcription_related, Transcription regulator: GNAT nuclease activity N-acetyltransferase activity N-terminal protein amino acid acetylation Base excision repair mRNA surveillance pathway cellular process | details |
| TissueCFM001636 | Transcription_related, Transcription regulator: GNAT N-terminal protein amino acid acetylation negative regulation of translation nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay iron-sulfur cluster assembly CCR4-NOT core complex RNA degradation N-acetyltransferase activity cytoplasmic mRNA processing body 4 iron, 4 sulfur cluster binding | details |
| TissueCFM001692 | tissue development regulation of response to stimulus anatomical structure morphogenesis cellular response to stimulus plant organ development response to organic substance response to bacterium Transcription_related, Transcription factor: MYB-related Ubiquitin_Proteasome_system, DUB: USP response to osmotic stress defense response to other organism cellular protein metabolic process maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ABC transporters | details |
| TissueCFM001722 | bundle sheath cell fate specification diacylglycerol and triacylglycerol biosynthesis N-Glycan biosynthesis Transcription_related, Transcription regulator: GNAT leaf development N-terminal protein amino acid acetylation Transcription_related, Transcription factor: GRAS N-acetyltransferase activity | details |
| TissueCFM001802 | Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase tissue development regulation of response to stimulus plant organ development cellular response to stimulus anatomical structure morphogenesis response to organic substance response to bacterium defense response to other organism response to osmotic stress MAPK signaling pathway - plant mRNA surveillance pathway single-organism cellular process regulation of cellular process | details |
| TissueCFM001810 | Peroxisome protein import into peroxisome matrix fatty acid beta-oxidation queuosine biosynthetic process peroxisome organization Transcription_related, Transcription factor: G2-like Transcription_related, Transcription factor: NF-YB Transcription_related, Transcription regulator: Jumonji queuine tRNA-ribosyltransferase activity histone binding serine-type peptidase activity formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TissueCFM001826 | Transcription_related, Transcription regulator: Jumonji response to stress single-organism metabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |