TissueCFM001650's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| phosphocholine phosphatase activity | 0.001477651 | GO:0052731 |
| phosphoethanolamine phosphatase activity | 0.001477651 | GO:0052732 |
| Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase | 0.003900421 | kinase family |
| Vitamin B6 metabolism | 0.005316398 | KEGG pathway |
| Transcription_related, Transcription factor: TCP | 0.009084858 | TF family |
| Transcription_related, Transcription factor: Trihelix | 0.009084858 | TF family |
| NF-kappa B signaling pathway | 0.012195236 | KEGG pathway |
| dephosphorylation | 0.043888775 | GO:0016311 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000284 | AT1G62520 (8.00E-61) | unknown protein |
| CRO_T004432 | AT4G28760 (0) | TRM20|TON1 Recruiting Motif 20 |
| CRO_T013119 | AT5G47660 (2.00E-15) | Homeodomain-like superfamily protein |
| CRO_T020459 | AT3G02150 (3.00E-26) | PTF1|plastid transcription factor 1; TCP13|TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 13 |
| CRO_T032655 | AT1G73010 (2.00E-79) | AtPPsPase1|pyrophosphate-specific phosphatase1; ATPS2|phosphate starvation-induced gene 2 |
| CRO_T032861 | AT3G51990 (2.00E-111) | Protein kinase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000688 | Transcription_related, Transcription factor: MIKC proline-tRNA ligase activity regulation of photosynthesis prolyl-tRNA aminoacylation cytokinesis plant ovule development seed development microtubule cytoskeleton organization embryo sac development Aminoacyl-tRNA biosynthesis RNA degradation microtubule binding | details |
| TissueCFM000778 | protein phosphorylation ATP binding protein serine/threonine kinase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 plasma membrane cell surface cortical microtubule endocytic vesicle α-amyrin biosynthesis 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I oxidized GTP and dGTP detoxification vernolate biosynthesis I Transcription_related, Transcription factor: C3H (R)-2-hydroxyglutarate dehydrogenase activity 2-hydroxyglutarate dehydrogenase activity fatty acid in-chain hydroxylase activity Cytochrome_P450, Cytochrome P450: CYP77A regulation of asymmetric cell division cuticle development Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase Protein_kinases_phosphatases, PPC:1.9.3: Putative receptor like protein kinase root cap development mangrove triterpenoid biosynthesis poly-hydroxy fatty acids biosynthesis | details |
| TissueCFM001276 | epoxide hydrolase activity cellular transition metal ion homeostasis metal ion transport actin binding transition metal ion binding | details |
| TissueCFM001588 | phosphocholine phosphatase activity phosphoethanolamine phosphatase activity UDP-glucuronate decarboxylase activity asparaginase activity Vitamin B6 metabolism L-asparagine degradation I superpathway of aspartate and asparagine biosynthesis UDP-D-xylose biosynthesis Transcription_related, Transcription factor: C2C2-Dof dephosphorylation actin binding Transcription_related, Transcription factor: C2H2 Amino sugar and nucleotide sugar metabolism | details |
| TissueCFM001703 | spindle microtubule HAUS complex protein phosphorylation spindle assembly Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase NF-kappa B signaling pathway microtubule minus-end binding protein serine/threonine kinase activity Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family Transcription_related, Transcription factor: C3H formation of glycosidic bonds, GlycosylTransferases: GTnc transferase activity, transferring glycosyl groups | details |
| TissueCFM001772 | Vitamin B6 metabolism L-asparagine degradation I structural constituent of cell wall phosphoethanolamine phosphatase activity phosphocholine phosphatase activity asparaginase activity photorespiration superpathway of aspartate and asparagine biosynthesis pyrimidine nucleobase metabolic process pyrimidine nucleoside salvage uridine kinase activity Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase chloroplast part cytosol Transcription_related, Transcription factor: C2H2 Transcription_related, Transcription factor: HB lipid binding | details |
Expression profiles
 Show details about module gene expression profiling |