TreatCFM000088's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000967 | AT3G21140 (3.00E-79) | Pyridoxamine 5'-phosphate oxidase family protein |
| CRO_T002532 | AT3G03450 (7.00E-41) | RGL2|RGA-like 2 |
| CRO_T003471 | - | - |
| CRO_T003676 | - | - |
| CRO_T005904 | - | - |
| CRO_T006341 | - | - |
| CRO_T006687 | - | - |
| CRO_T006850 | AT2G46560 (0) | transducin family protein / WD-40 repeat family protein |
| CRO_T007444 | - | - |
| CRO_T008972 | - | - |
| CRO_T009508 | AT1G26540 (0.00002) | Agenet domain-containing protein |
| CRO_T009643 | - | - |
| CRO_T010043 | - | - |
| CRO_T010454 | - | - |
| CRO_T010989 | - | - |
| CRO_T011142 | - | - |
| CRO_T011398 | AT1G76090 (0.00000001) | SMT3|sterol methyltransferase 3 |
| CRO_T011886 | - | - |
| CRO_T012477 | - | - |
| CRO_T013037 | - | - |
| CRO_T013051 | - | - |
| CRO_T014313 | - | - |
| CRO_T014486 | AT1G07150 (5.00E-34) | MAPKKK13|mitogen-activated protein kinase kinase kinase 13 |
| CRO_T016669 | AT1G20030 (2.00E-61) | Pathogenesis-related thaumatin superfamily protein |
| CRO_T017089 | - | - |
| CRO_T017351 | AT5G14890 (5.00E-12) | NHL domain-containing protein |
| CRO_T019089 | - | - |
| CRO_T020519 | AT3G19950 (4.00E-13) | RING/U-box superfamily protein |
| CRO_T021045 | AT2G17450 (8.00E-13) | RHA3A|RING-H2 finger A3A |
| CRO_T021799 | AT1G03700 (3.00E-19) | Uncharacterised protein family (UPF0497) |
| CRO_T022522 | - | - |
| CRO_T024733 | - | - |
| CRO_T025483 | AT4G32820 (1.00E-26) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T025573 | - | - |
| CRO_T026293 | - | - |
| CRO_T028386 | - | - |
| CRO_T028987 | AT4G37190 (3.00E-167) | LOCATED IN: cytosol, plasma membrane |
| CRO_T029623 | - | - |
| CRO_T031103 | AT2G25610 (1.00E-47) | ATPase, F0/V0 complex, subunit C protein |
| CRO_T031228 | - | - |
| CRO_T031894 | - | - |
| CRO_T032217 | AT2G28150 (5.00E-130) | Domain of unknown function (DUF966) |
| CRO_T032230 | - | - |
| CRO_T032776 | - | - |
| CRO_T032934 | AT4G38020 (8.00E-39) | tRNA/rRNA methyltransferase (SpoU) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000012 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc DNA-directed RNA polymerase III complex transcription from RNA polymerase III promoter glycosyl compound metabolic process | details |
| TreatCFM000045 | photorespiration transcription from RNA polymerase III promoter DNA-directed RNA polymerase III complex oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor RNA polymerase III activity | details |
| TreatCFM000321 | Zeatin biosynthesis | details |
| TreatCFM000641 | Ubiquitin_Proteasome_system, E3 adaptor: DWD acetyl-CoA carboxylase complex HAUS complex ureidoglycolate hydrolase activity spindle assembly fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity fatty acid biosynthetic process | details |
| TreatCFM001777 | Betalain biosynthesis intralumenal vesicle formation protein import into chloroplast stroma cellular aromatic compound metabolic process choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases oxidoreductase activity, acting on single donors with incorporation of molecular oxygen UDP-glycosyltransferase activity | details |
| TreatCFM001991 | nucleotide-excision repair factor 1 complex cytosol single-stranded DNA endodeoxyribonuclease activity UTP:xylose-1-phosphate uridylyltransferase activity UTP:arabinose-1-phosphate uridylyltransferase activity UTP:galactose-1-phosphate uridylyltransferase activity glucuronate-1-phosphate uridylyltransferase activity leucine-tRNA ligase activity nucleotide-excision repair, DNA incision, 5'-to lesion UTP:glucose-1-phosphate uridylyltransferase activity nucleotide-sugar biosynthetic process UDP-glucose metabolic process UDP-D-galactose metabolic process nucleotide-excision repair involved in interstrand cross-link repair leucyl-tRNA aminoacylation UDP-glucuronate metabolic process UDP-L-arabinose metabolic process resolution of meiotic recombination intermediates D-galactose degradation III UDP-α-D-glucuronate biosynthesis (from myo-inositol) UDP-N-acetyl-D-glucosamine biosynthesis II UDP-D-galacturonate biosynthesis II (from D-galacturonate) UDP-glucose biosynthesis UDP-L-arabinose biosynthesis II (from L-arabinose) Transcription_related, Transcription regulator: Jumonji double-strand break repair via homologous recombination regulation of translational fidelity stachyose degradation sucrose biosynthesis II aminoacyl-tRNA editing activity Nucleotide excision repair ADP binding pollen tube damaged DNA binding single-stranded DNA binding Ubiquitin_Proteasome_system, E3 adaptor: SKP1 isomerase activity pollen development | details |
Expression profiles
 Show details about module gene expression profiling |