TreatCFM000162's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cell surface receptor signaling pathway | 1.49E-05 | GO:0007166 |
| cAMP-dependent protein kinase activity | 0.002955301 | GO:0004691 |
| protein phosphorylation | 0.004807433 | GO:0006468 |
| Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase | 0.006909786 | kinase family |
| glycolysis I (from glucose 6-phosphate) | 0.009362512 | plantCyc |
| plasma membrane | 0.016809519 | GO:0005886 |
| polysaccharide binding | 0.044872314 | GO:0030247 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003915 | - | - |
| CRO_T005133 | AT1G12850 (7.00E-110) | Phosphoglycerate mutase family protein |
| CRO_T016673 | AT4G00955 (5.00E-29) | unknown protein |
| CRO_T016674 | AT2G23450 (6.00E-137) | Protein kinase superfamily protein |
| CRO_T024546 | - | - |
| CRO_T033127 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000050 | details | |
| TreatCFM000584 | fucose biosynthetic process endomembrane system organization xyloglucan biosynthetic process Oxidative phosphorylation aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis salicylic acid mediated signaling pathway aerobic respiration formation of glycosidic bonds, GlycosylTransferases: GTnc unidimensional cell growth Transcription_related, Transcription factor: HB integral component of Golgi membrane hydrogen ion transmembrane transport | details |
| TreatCFM000737 | endomembrane system organization xyloglucan biosynthetic process fucose biosynthetic process megagametogenesis integral component of Golgi membrane salicylic acid mediated signaling pathway Ribosome biogenesis in eukaryotes transferase activity, transferring glycosyl groups unidimensional cell growth formation of glycosidic bonds, GlycosylTransferases: GTnc rRNA processing aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) glycolysis I (from glucose 6-phosphate) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis | details |
| TreatCFM000815 | xyloglucan biosynthetic process fucose biosynthetic process endomembrane system organization formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth transferase activity, transferring glycosyl groups aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) indole-3-acetyl-amide conjugate biosynthesis NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis trans-Golgi network endosome | details |
| TreatCFM000921 | formation of glycosidic bonds, GlycosylTransferases: GTnc fucose biosynthetic process xyloglucan biosynthetic process endomembrane system organization ncRNA processing RNA phosphodiester bond hydrolysis ribonuclease activity ribosomal small subunit biogenesis megagametogenesis salicylic acid mediated signaling pathway unidimensional cell growth integral component of Golgi membrane aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) CDP-diacylglycerol biosynthesis I diacylglycerol and triacylglycerol biosynthesis glycolysis I (from glucose 6-phosphate) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis Glutathione metabolism Glycerolipid metabolism rRNA processing | details |
| TreatCFM001044 | Cytochrome_P450, Cytochrome P450: CYP87A Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TreatCFM001114 | xyloglucan biosynthetic process endomembrane system organization fucose biosynthetic process integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth formation of glycosidic bonds, GlycosylTransferases: GTnc aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) glycolysis I (from glucose 6-phosphate) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | details |
| TreatCFM001161 | Transcription_related, Transcription regulator: LIM glycolysis I (from glucose 6-phosphate) Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001504 | glycolysis I (from glucose 6-phosphate) | details |
Expression profiles
 Show details about module gene expression profiling |