TreatCFM000163's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| dihydropteroate synthase activity | 0.005266852 | GO:0004156 |
| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | 0.005266852 | GO:0003848 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I | 0.008616954 | plantCyc |
| Folate biosynthesis | 0.009917054 | KEGG pathway |
| L-cysteine biosynthesis I | 0.011194097 | plantCyc |
| tetrahydrofolate biosynthesis II | 0.012619164 | plantCyc |
| 3-phosphoinositide biosynthesis | 0.015467948 | plantCyc |
| organic phosphonate transport | 0.016847203 | GO:0015716 |
| organophosphate ester transport | 0.016847203 | GO:0015748 |
| folic acid-containing compound biosynthetic process | 0.016847203 | GO:0009396 |
| cysteine biosynthetic process from serine | 0.016847203 | GO:0006535 |
| cysteine synthase activity | 0.017543724 | GO:0004124 |
| organic phosphonate transmembrane-transporting ATPase activity | 0.019727942 | GO:0015416 |
| cellular amino acid biosynthetic process | 0.024234178 | GO:0008652 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001484 | AT2G43750 (3.00E-26) | ACS1|ARABIDOPSIS CYSTEINE SYNTHASE 1; ATCS-B|CYSTEIN SYNTHASE-B; CPACS1|CHLOROPLAST O-ACETYLSERINE SULFHYDRYLASE 1; OASB|O-acetylserine (thiol) lyase B |
| CRO_T024010 | AT1G66950 (4.00E-104) | ABCG39|ATP-binding cassette G39; ATPDR11|PLEIOTROPIC DRUG RESISTANCE 11 |
| CRO_T025397 | AT2G30580 (6.00E-58) | DRIP2|DREB2A-interacting protein 2 |
| CRO_T025408 | AT1G69190 (0) | Dihydropterin pyrophosphokinase / Dihydropteroate synthase |
| CRO_T028954 | - | - |
| CRO_T032324 | - | - |
| CRO_T032458 | AT3G14205 (0) | Phosphoinositide phosphatase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000017 | Oxidative phosphorylation mitochondrion NADH dehydrogenase (ubiquinone) activity mitochondrial inner membrane heme transporter activity heme transport cytochrome-c oxidase activity respiratory chain cytochrome complex assembly hydrogen ion transmembrane transport ATP synthesis coupled electron transport heme binding aerobic respiration hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances aerobic electron transport chain electron transport chain generation of precursor metabolites and energy ATP synthesis coupled proton transport mitochondrial electron transport, NADH to ubiquinone hydrogen ion transmembrane transporter activity quinone binding photosynthetic electron transport in photosystem II succinate dehydrogenase activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity succinate dehydrogenase complex | details |
| TreatCFM000067 | Folate biosynthesis | details |
| TreatCFM000533 | PI3K-Akt signaling pathway Transcription_related, Transcription factor: CAMTA TORC1 complex TOR signaling organophosphate ester transport organic phosphonate transport transmembrane transport plasma membrane | details |
| TreatCFM000654 | Glutathione metabolism toxin catabolic process glutathione metabolic process glutathione transferase activity cytoplasm guanine deaminase activity guanosine deaminase activity guanosine nucleotides degradation II L-cysteine biosynthesis I cysteine synthase activity cysteine biosynthetic process from serine RNA modification cellular amino acid biosynthetic process ubiquitin-dependent protein catabolic process | details |
| TreatCFM000655 | L-cysteine biosynthesis I hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Arachidonic acid metabolism Glutathione metabolism cell cytoplasm cell wall biogenesis cellular amino acid biosynthetic process toxin catabolic process xyloglucan metabolic process cysteine biosynthetic process from serine glutathione metabolic process cysteine synthase activity glutathione transferase activity protein disulfide oxidoreductase activity xyloglucan:xyloglucosyl transferase activity apoplast cell redox homeostasis | details |
| TreatCFM001310 | L-cysteine biosynthesis I transmembrane transport cysteine biosynthetic process from serine organophosphate ester transport organic phosphonate transport Ascorbate and aldarate metabolism cytoplasm plasma membrane cellular amino acid biosynthetic process monodehydroascorbate reductase (NADH) activity organic phosphonate transmembrane-transporting ATPase activity cysteine synthase activity cell redox homeostasis | details |
Expression profiles
 Show details about module gene expression profiling |