TreatCFM000655's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| L-cysteine biosynthesis I | 0.002303262 | plantCyc |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.005661614 | cazy family |
| Arachidonic acid metabolism | 0.011694348 | KEGG pathway |
| Glutathione metabolism | 0.021873507 | KEGG pathway |
| cell | 0.027265933 | GO:0005623 |
| cytoplasm | 0.027265933 | GO:0005737 |
| cell wall biogenesis | 0.02882975 | GO:0042546 |
| cellular amino acid biosynthetic process | 0.02882975 | GO:0008652 |
| toxin catabolic process | 0.02882975 | GO:0009407 |
| xyloglucan metabolic process | 0.02882975 | GO:0010411 |
| cysteine biosynthetic process from serine | 0.02882975 | GO:0006535 |
| glutathione metabolic process | 0.030013245 | GO:0006749 |
| cysteine synthase activity | 0.038531229 | GO:0004124 |
| glutathione transferase activity | 0.047064946 | GO:0004364 |
| protein disulfide oxidoreductase activity | 0.047064946 | GO:0015035 |
| xyloglucan:xyloglucosyl transferase activity | 0.047064946 | GO:0016762 |
| apoplast | 0.047928798 | GO:0048046 |
| cell redox homeostasis | 0.048748898 | GO:0045454 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001484 | AT2G43750 (3.00E-26) | ACS1|ARABIDOPSIS CYSTEINE SYNTHASE 1; ATCS-B|CYSTEIN SYNTHASE-B; CPACS1|CHLOROPLAST O-ACETYLSERINE SULFHYDRYLASE 1; OASB|O-acetylserine (thiol) lyase B |
| CRO_T003684 | AT5G42150 (7.00E-114) | Glutathione S-transferase family protein |
| CRO_T006125 | AT2G17970 (2.00E-34) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T008326 | AT5G57510 (6.00E-18) | unknown protein |
| CRO_T020112 | AT5G13870 (8.00E-83) | EXGT-A4|endoxyloglucan transferase A4; XTH5|xyloglucan endotransglucosylase/hydrolase 5 |
| CRO_T025773 | AT1G10370 (2.00E-59) | ATGSTU17|GLUTATHIONE S-TRANSFERASE TAU 17; ERD9|EARLY-RESPONSIVE TO DEHYDRATION 9; GST30|GLUTATHIONE S-TRANSFERASE 30; GST30B|GLUTATHIONE S-TRANSFERASE 30B; GSTU17|GLUTATHIONE S-TRANSFERASE U17 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000163 | dihydropteroate synthase activity 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Folate biosynthesis L-cysteine biosynthesis I tetrahydrofolate biosynthesis II 3-phosphoinositide biosynthesis organic phosphonate transport organophosphate ester transport folic acid-containing compound biosynthetic process cysteine biosynthetic process from serine cysteine synthase activity organic phosphonate transmembrane-transporting ATPase activity cellular amino acid biosynthetic process | details |
| TreatCFM000654 | Glutathione metabolism toxin catabolic process glutathione metabolic process glutathione transferase activity cytoplasm guanine deaminase activity guanosine deaminase activity guanosine nucleotides degradation II L-cysteine biosynthesis I cysteine synthase activity cysteine biosynthetic process from serine RNA modification cellular amino acid biosynthetic process ubiquitin-dependent protein catabolic process | details |
Expression profiles
 Show details about module gene expression profiling |