TreatCFM000212's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.002392556 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.002392556 | cazy family |
| catabolic process | 0.002955301 | GO:0009056 |
| macromolecule metabolic process | 0.006889591 | GO:0043170 |
| sulfate transmembrane transport | 0.006889591 | GO:1902358 |
| secondary active sulfate transmembrane transporter activity | 0.006909786 | GO:0008271 |
| hydrolase activity, acting on glycosyl bonds | 0.008227641 | GO:0016798 |
| plant-type cell wall organization | 0.013632967 | GO:0009664 |
| Amino sugar and nucleotide sugar metabolism | 0.014279181 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003219 | AT2G18660 (8.00E-12) | PNP-A|plant natriuretic peptide A |
| CRO_T025030 | AT2G03090 (3.00E-100) | ATEXPA15|expansin A15; EXP15|EXPANSIN 15 |
| CRO_T026590 | AT4G24840 (1.00E-112) | unknown protein |
| CRO_T026783 | AT1G77990 (0) | SULTR2; 2|SULPHATE TRANSPORTER 2; 2 |
| CRO_T031627 | AT3G12500 (2.00E-80) | ATHCHIB|basic chitinase; PR-3|PATHOGENESIS-RELATED 3 |
| CRO_T033307 | AT1G17860 (4.00E-35) | Kunitz family trypsin and protease inhibitor protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000108 | details | |
| TreatCFM000213 | abscisic acid biosynthesis salvigenin biosynthesis Carotenoid biosynthesis Protein_kinases_phosphatases, PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) sulfate transmembrane transport aromatic compound biosynthetic process secondary active sulfate transmembrane transporter activity O-methyltransferase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen S-adenosylmethionine-dependent methyltransferase activity | details |
| TreatCFM001165 | Carbon metabolism formate-tetrahydrofolate ligase activity folic acid-containing compound biosynthetic process folate polyglutamylation folate transformations II L-valine degradation I tetrahydrofolate biosynthesis II methylmalonate-semialdehyde dehydrogenase (acylating) activity vindoline and vinblastine biosynthesis Endocytosis small GTPase mediated signal transduction oxidation-reduction process membrane | details |
| TreatCFM001643 | maintenance of protein location in nucleus bundle sheath cell fate specification asymmetric cell division radial pattern formation gravitropism leaf development nucleus Transcription_related, Transcription factor: GRAS | details |
| TreatCFM001862 | Protein_kinases_phosphatases, PPC:1.5.2: LRK10 Like Kinase (Type 1) NF-kappa B signaling pathway Endocytosis proton transport glucose import glucose transmembrane transport small GTPase mediated signal transduction secondary metabolite biosynthetic process | details |
Expression profiles
 Show details about module gene expression profiling |