TreatCFM000267's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protection from non-homologous end joining at telomere | 0.003939237 | GO:0031848 |
| interstrand cross-link repair | 0.003939237 | GO:0036297 |
| double-strand break repair via nonhomologous end joining | 0.0059058 | GO:0006303 |
| Transcriptional misregulation in cancers | 0.010623846 | KEGG pathway |
| 5'-3' exodeoxyribonuclease activity | 0.015418643 | GO:0035312 |
| Glycerophospholipid metabolism | 0.019747289 | KEGG pathway |
| phosphatidylcholine acyl editing | 0.019846156 | plantCyc |
| phospholipases | 0.019846156 | plantCyc |
| phospholipid remodeling (phosphatidylcholine, yeast) | 0.019846156 | plantCyc |
| negative regulation of catalytic activity | 0.021088177 | GO:0043086 |
| pectinesterase inhibitor activity | 0.042269918 | GO:0046910 |
| DNA binding | 0.042269918 | GO:0003677 |
| damaged DNA binding | 0.042269918 | GO:0003684 |
| pectinesterase activity | 0.047074051 | GO:0030599 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005902 | AT5G49750 (1.00E-14) | Leucine-rich repeat (LRR) family protein |
| CRO_T012619 | AT1G27410 (7.00E-119) | DNA repair metallo-beta-lactamase family protein |
| CRO_T015104 | AT1G09200 (3.00E-43) | H3.1|histone 3.1 |
| CRO_T020043 | AT5G46940 (3.00E-15) | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| CRO_T020456 | AT2G06925 (4.00E-44) | ATSPLA2-ALPHA|PHOSPHOLIPASE A2-ALPHA |
| CRO_T020976 | AT5G51550 (2.00E-145) | EXL3|EXORDIUM like 3 |
| CRO_T030627 | AT3G03550 (6.00E-15) | RING/U-box superfamily protein |
| CRO_T032831 | AT3G18010 (2.00E-10) | WOX1|WUSCHEL related homeobox 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000496 | homogalacturonan biosynthesis 5'-3' exodeoxyribonuclease activity protection from non-homologous end joining at telomere regulation of sequestering of zinc ion response to zinc ion interstrand cross-link repair double-strand break repair via nonhomologous end joining pectin biosynthetic process nuclear chromosome, telomeric region damaged DNA binding zinc ion transmembrane transporter activity polygalacturonate 4-alpha-galacturonosyltransferase activity zinc II ion transmembrane transport formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E3 adaptor: BTB Golgi membrane | details |
Expression profiles
 Show details about module gene expression profiling |