TreatCFM000448's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein targeting to peroxisome | 0.002925532 | GO:0006625 |
| calcium-dependent cysteine-type endopeptidase activity | 0.005849767 | GO:0004198 |
| Peroxisome | 0.006014577 | KEGG pathway |
| biological regulation | 0.007307347 | GO:0065007 |
| carbohydrate binding | 0.028105188 | GO:0030246 |
| protein binding | 0.028105188 | GO:0005515 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.035293061 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001456 | AT4G03180 (1.00E-23) | |
| CRO_T003625 | AT5G05570 (0) | transducin family protein / WD-40 repeat family protein |
| CRO_T008252 | AT4G17150 (2.00E-31) | alpha/beta-Hydrolases superfamily protein |
| CRO_T012919 | AT2G05720 (4.00E-14) | Transducin/WD40 repeat-like superfamily protein |
| CRO_T014445 | AT3G62600 (3.00E-36) | ATERDJ3B; ERDJ3B|DNAJ heat shock family protein |
| CRO_T022316 | AT1G55350 (0) | DEK1|DEFECTIVE KERNEL 1; EMB1275|embryo defective 1275; EMB80|EMBRYO DEFECTIVE 80 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000087 | integral component of membrane jasmonic acid biosynthesis AP-3 adaptor complex C-19 gibberellin 2-beta-dioxygenase activity aminoacyl-tRNA hydrolase activity calcium-dependent cysteine-type endopeptidase activity gibberellin catabolic process endoplasmic reticulum organization lytic vacuole organization regulation of autophagy Autophagy - animal Diterpenoid biosynthesis Lysosome Phenylalanine metabolism pre-autophagosomal structure potassium ion transmembrane transporter activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Golgi to vacuole transport mitochondrial translation regulation of intracellular pH formation of glycosidic bonds, GlycosylTransferases: GTnc Golgi organization | details |
| TreatCFM001079 | calcium-dependent cysteine-type endopeptidase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase L-ornithine transmembrane transporter activity asparaginase activity L-histidine transmembrane transporter activity arginine transmembrane transporter activity sedoheptulose-bisphosphatase activity L-lysine transmembrane transporter activity early endosome membrane L-histidine transmembrane transport L-arginine import L-ornithine transmembrane transport arginine transmembrane transport L-lysine transmembrane transport proline biosynthetic process ascorbate glutathione cycle fructose 2,6-bisphosphate biosynthesis L-ascorbate degradation V L-asparagine degradation I ornithine-citrulline shuttle superpathway of aspartate and asparagine biosynthesis seed maturation proteolysis Ascorbate and aldarate metabolism sucrose biosynthesis I (from photosynthesis) Calvin-Benson-Bassham cycle RNA splicing seed germination Endocytosis | details |
| TreatCFM001428 | Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family NAD transporter activity NAD transport protein import into mitochondrial matrix activation of GTPase activity regulation of vesicle fusion biological regulation mitochondrial inner membrane presequence translocase complex Rab GTPase binding GTPase activator activity cell part | details |
Expression profiles
 Show details about module gene expression profiling |