TreatCFM000633's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Peroxisome | 0.006014577 | KEGG pathway |
| poly(A)+ mRNA export from nucleus | 0.008096328 | GO:0016973 |
| aspartic-type endopeptidase activity | 0.008130157 | GO:0004190 |
| ethylene-activated signaling pathway | 0.014158109 | GO:0009873 |
| protein catabolic process | 0.018677164 | GO:0030163 |
| root development | 0.018677164 | GO:0048364 |
| proteasome complex | 0.034376359 | GO:0000502 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008638 | AT3G03490 (8.00E-68) | PEX19-1|peroxin 19-1 |
| CRO_T019016 | AT3G08600 (7.00E-71) | Protein of unknown function (DUF1191) |
| CRO_T019219 | AT2G19560 (1.00E-179) | EER5|ENHANCED ETHYLENE RESPONSE 5; ESSP1|ectopic expression of seed storage proteins 1 |
| CRO_T027634 | AT3G50050 (2.00E-10) | Eukaryotic aspartyl protease family protein |
| CRO_T028270 | - | - |
| CRO_T032411 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000634 | poly(A)+ mRNA export from nucleus aspartic-type endopeptidase activity ethylene-activated signaling pathway Transcription_related, Transcription factor: MYB proteasome complex protein catabolic process root development | details |
| TreatCFM000709 | Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase Base excision repair Diterpenoid biosynthesis | details |
| TreatCFM001352 | Cytochrome_P450, Cytochrome P450: CYP716A betulinate biosynthesis guanosine nucleotides degradation I guanosine nucleotides degradation II oleanolate biosynthesis pyrimidine salvage pathway ursolate biosynthesis adenosine nucleotides degradation I Endocytosis poly(A)+ mRNA export from nucleus Transcription_related, Transcription factor: bHLH 5'-nucleotidase activity ethylene-activated signaling pathway proteasome complex protein transport response to auxin root development | details |
Expression profiles
 Show details about module gene expression profiling |