TreatCFM001352's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP716A | 0.003722304 | CYP450 family |
| betulinate biosynthesis | 0.010713484 | plantCyc |
| guanosine nucleotides degradation I | 0.010713484 | plantCyc |
| guanosine nucleotides degradation II | 0.010713484 | plantCyc |
| oleanolate biosynthesis | 0.010713484 | plantCyc |
| pyrimidine salvage pathway | 0.010713484 | plantCyc |
| ursolate biosynthesis | 0.010713484 | plantCyc |
| adenosine nucleotides degradation I | 0.012848584 | plantCyc |
| Endocytosis | 0.017603897 | KEGG pathway |
| poly(A)+ mRNA export from nucleus | 0.01805591 | GO:0016973 |
| Transcription_related, Transcription factor: bHLH | 0.021418771 | TF family |
| 5'-nucleotidase activity | 0.022568219 | GO:0008253 |
| ethylene-activated signaling pathway | 0.031574503 | GO:0009873 |
| proteasome complex | 0.034376359 | GO:0000502 |
| protein transport | 0.04498662 | GO:0015031 |
| response to auxin | 0.04498662 | GO:0009733 |
| root development | 0.04498662 | GO:0048364 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007721 | AT1G06400 (3.00E-60) | ATRABA1A|RAB GTPASE HOMOLOG A1A |
| CRO_T009376 | AT5G36140 (9.00E-65) | CYP716A2|cytochrome P450, family 716, subfamily A, polypeptide 2 |
| CRO_T017027 | AT1G63520 (8.00E-55) | Protein of unknown function (DUF3527) |
| CRO_T019219 | AT2G19560 (1.00E-179) | EER5|ENHANCED ETHYLENE RESPONSE 5; ESSP1|ectopic expression of seed storage proteins 1 |
| CRO_T023973 | AT2G41130 (4.00E-25) | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| CRO_T033693 | AT2G23890 (0) | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000093 | defense response to bacterium receptor-mediated endocytosis regulation of anion channel activity defense response by callose deposition in cell wall response to jasmonic acid response to salicylic acid detection of bacterium defense response to oomycetes motile cilium plasma membrane Cul3-RING ubiquitin ligase complex | details |
| TreatCFM000592 | homogalacturonan biosynthesis pectin biosynthetic process Amino sugar and nucleotide sugar metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc polygalacturonate 4-alpha-galacturonosyltransferase activity Transcription_related, Transcription factor: bHLH | details |
| TreatCFM000633 | Peroxisome poly(A)+ mRNA export from nucleus aspartic-type endopeptidase activity ethylene-activated signaling pathway protein catabolic process root development proteasome complex | details |
| TreatCFM000634 | poly(A)+ mRNA export from nucleus aspartic-type endopeptidase activity ethylene-activated signaling pathway Transcription_related, Transcription factor: MYB proteasome complex protein catabolic process root development | details |
| TreatCFM000709 | Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase Base excision repair Diterpenoid biosynthesis | details |
| TreatCFM001286 | Transcription_related, Transcription factor: C2C2-GATA Endocytosis | details |
| TreatCFM001775 | Cytochrome_P450, Cytochrome P450: CYP716A Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II betulinate biosynthesis oleanolate biosynthesis ursolate biosynthesis MicroRNAs in cancer Transcription_related, Transcription factor: C2H2 D-arabinono-1,4-lactone oxidase activity L-gulonolactone oxidase activity ribonuclease III activity | details |
Expression profiles
 Show details about module gene expression profiling |