TreatCFM000652's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glyoxylate cycle | 0.003718236 | plantCyc |
| cilium morphogenesis | 0.005266852 | GO:0060271 |
| intraciliary retrograde transport | 0.005266852 | GO:0035721 |
| cellular glucose homeostasis | 0.006317981 | GO:0001678 |
| coenzyme A transmembrane transport | 0.006317981 | GO:0035349 |
| glucose 6-phosphate metabolic process | 0.006317981 | GO:0051156 |
| intraciliary transport particle A | 0.007509087 | GO:0030991 |
| mannokinase activity | 0.007700501 | GO:0019158 |
| glucokinase activity | 0.007700501 | GO:0004340 |
| glucose binding | 0.007700501 | GO:0005536 |
| glyoxylate reductase (NADP) activity | 0.007700501 | GO:0030267 |
| hydroxypyruvate reductase activity | 0.007700501 | GO:0016618 |
| coenzyme A transmembrane transporter activity | 0.007700501 | GO:0015228 |
| protein localization to cilium | 0.007895376 | GO:0061512 |
| fructokinase activity | 0.013193838 | GO:0008865 |
| carbohydrate phosphorylation | 0.015773961 | GO:0046835 |
| cilium | 0.016253828 | GO:0005929 |
| chloroplast outer membrane | 0.016253828 | GO:0009707 |
| glycolytic process | 0.024283723 | GO:0006096 |
| cytosol | 0.027291423 | GO:0005829 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003385 | AT4G34530 (0.00000003) | CIB1|cryptochrome-interacting basic-helix-loop-helix 1 |
| CRO_T007019 | AT3G19990 (6.00E-162) | unknown protein |
| CRO_T011130 | AT1G54460 (2.00E-32) | TPX2 (targeting protein for Xklp2) protein family |
| CRO_T012736 | AT1G19400 (2.00E-80) | Erythronate-4-phosphate dehydrogenase family protein |
| CRO_T015931 | AT2G23780 (2.00E-45) | RING/U-box superfamily protein |
| CRO_T030668 | AT4G29130 (5.00E-173) | ATHXK1|HEXOKINASE 1; GIN2|GLUCOSE INSENSITIVE 2 |
| CRO_T032656 | AT5G56450 (1.00E-17) | PM-ANT|Mitochondrial substrate carrier family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000086 | Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII γ-linolenate biosynthesis I (plants) arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) uracil degradation I (reductive) Protein_kinases_phosphatases, PPC:1.3.3: Leucine Rich Repeat Receptor Kinase I & Unknown Receptor Kinase I Pyrimidine metabolism hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc beta-ureidopropionase activity metallochaperone activity protein phosphorylation uracil catabolic process | details |
| TreatCFM000653 | 5-aminoimidazole ribonucleotide biosynthesis I purine nucleobase biosynthetic process coenzyme A transmembrane transport coenzyme A transmembrane transporter activity glyoxylate reductase (NADP) activity phosphoribosylamine-glycine ligase activity hydroxypyruvate reductase activity metal ion binding | details |
| TreatCFM001197 | uracil degradation I (reductive) Starch and sucrose metabolism chloroplast isoamylase complex MicroRNAs in cancer adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc beta-ureidopropionase activity isoamylase activity cytoskeleton-dependent intracellular transport protein localization amylopectin biosynthetic process uracil catabolic process glycogen metabolic process Pyrimidine metabolism trehalose biosynthetic process ribonuclease III activity ATP-dependent microtubule motor activity, plus-end-directed Ubiquitin_Proteasome_system, E3 adaptor: BTB RNA phosphodiester bond hydrolysis, endonucleolytic kinesin complex protein catabolic process microtubule | details |
| TreatCFM001497 | formation of glycosidic bonds, GlycosylTransferases: GTnc rRNA primary transcript binding maturation of LSU-rRNA maturation of 5.8S rRNA trehalose biosynthetic process Phenylpropanoid biosynthesis Starch and sucrose metabolism carbohydrate transport protein catabolic process ribosomal large subunit assembly proton transport hydrogen peroxide catabolic process | details |
| TreatCFM001949 | cilium morphogenesis intraciliary retrograde transport linoleate biosynthesis I (plants) intraciliary transport particle A glycyl-tRNA aminoacylation protein localization to cilium regulation of protein kinase activity glycine-tRNA ligase activity protein kinase regulator activity oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water glyoxylate cycle cilium plant sterol biosynthesis Aminoacyl-tRNA biosynthesis Fatty acid metabolism Steroid biosynthesis lipid metabolic process | details |
| TreatCFM002132 | xylulokinase activity xylulose metabolic process external side of plasma membrane carbohydrate phosphorylation multidimensional cell growth response to salt stress Pentose and glucuronate interconversions | details |
Expression profiles
 Show details about module gene expression profiling |