TreatCFM000683's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Spliceosome | 0.00283656 | KEGG pathway |
| Vitamin digestion and absorption | 0.00283656 | KEGG pathway |
| molybdenum cofactor biosynthesis | 0.00424822 | plantCyc |
| Transcription_related, Transcription factor: BBR-BPC | 0.007798076 | TF family |
| Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase | 0.018800576 | kinase family |
| Cell cycle | 0.023528126 | KEGG pathway |
| Protein export | 0.023528126 | KEGG pathway |
| NADPH-hemoprotein reductase activity | 0.023528323 | GO:0003958 |
| endoplasmic reticulum signal peptide binding | 0.023528323 | GO:0030942 |
| signal recognition particle binding | 0.027441193 | GO:0005047 |
| signal recognition particle, endoplasmic reticulum targeting | 0.027783758 | GO:0005786 |
| 7S RNA binding | 0.029392156 | GO:0008312 |
| nucleotide binding | 0.037247967 | GO:0000166 |
| FMN binding | 0.046920578 | GO:0010181 |
| calcium-dependent protein serine/threonine kinase activity | 0.046920578 | GO:0009931 |
| calmodulin-dependent protein kinase activity | 0.046920578 | GO:0004683 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000003 | AT1G49910 (4.00E-146) | BUB3.2|BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.2 |
| CRO_T010083 | AT1G49580 (0) | Calcium-dependent protein kinase (CDPK) family protein |
| CRO_T021115 | AT2G21240 (6.00E-36) | ATBPC4|BASIC PENTACYSTEINE 4 |
| CRO_T022537 | AT5G07060 (7.00E-120) | MAC5C|MOS4-associated complex subunit 5C |
| CRO_T024431 | AT2G28720 (3.00E-43) | Histone superfamily protein |
| CRO_T031232 | AT5G01460 (2.00E-171) | LMBR1-like membrane protein |
| CRO_T031653 | AT5G61970 (6.00E-46) | signal recognition particle-related / SRP-related |
| CRO_T033752 | AT3G02280 (0) | AtTAH18; TAH18|Flavodoxin family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000902 | Vitamin digestion and absorption molybdenum cofactor biosynthesis secondary shoot formation strigolactone biosynthetic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc proteasome-mediated ubiquitin-dependent protein catabolic process Ubiquitin_Proteasome_system, E3 adaptor: BTB | details |
Expression profiles
 Show details about module gene expression profiling |