TreatCFM000759's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| thiosulfate disproportionation IV (rhodanese) | 0.002832901 | plantCyc |
| Sulfur metabolism | 0.011986812 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase | 0.038062839 | kinase family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001077 | AT3G55550 (4.00E-67) | LecRK-S.4|L-type lectin receptor kinase S.4 |
| CRO_T002950 | - | - |
| CRO_T003098 | AT1G56240 (1.00E-05) | AtPP2-B13|phloem protein 2-B13 |
| CRO_T003940 | - | - |
| CRO_T004369 | - | - |
| CRO_T004984 | - | - |
| CRO_T005414 | - | - |
| CRO_T007517 | AT2G40280 (0) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T007871 | - | - |
| CRO_T009024 | - | - |
| CRO_T010493 | - | - |
| CRO_T010634 | - | - |
| CRO_T012811 | - | - |
| CRO_T012888 | AT1G16460 (5.00E-132) | ATMST2|MERCAPTOPYRUVATE SULFURTRANSFERASE 2; ATRDH2|rhodanese homologue 2; ST2|SULFURTRANSFERASE 2 |
| CRO_T013305 | - | - |
| CRO_T016592 | - | - |
| CRO_T017814 | - | - |
| CRO_T018004 | - | - |
| CRO_T019664 | - | - |
| CRO_T022129 | AT1G15910 (8.00E-34) | FDM1|factor of DNA methylation 1; IDNL1|INVOLVED IN DE NOVO 2 (IDN2) - LIKE 1; IDP1|IDN2 PARALOG 1 |
| CRO_T024006 | AT5G12260 (2.00E-163) | |
| CRO_T024886 | - | - |
| CRO_T026450 | - | - |
| CRO_T028292 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000050 | details | |
| TreatCFM000065 | Cytochrome_P450, Cytochrome P450: CYP724A | details |
| TreatCFM000115 | phosphatidylethanolamine biosynthesis II | details |
| TreatCFM000175 | lipid IVA biosynthesis mitochondrial respiratory chain AP-5 adaptor complex | details |
| TreatCFM000375 | 3-hydroxyacyl-CoA dehydrogenase activity fatty acid metabolic process unsaturated, even numbered fatty acid β-oxidation fatty acid β-oxidation II (peroxisome) Fatty acid metabolism very long chain fatty acid biosynthesis II formation of glycosidic bonds, GlycosylTransferases: GTnc jasmonic acid biosynthesis ribosome biogenesis transferase activity, transferring acyl groups metal ion binding Ribosome biogenesis in eukaryotes | details |
| TreatCFM000410 | details | |
| TreatCFM000444 | S-adenosylmethionine-dependent methyltransferase activity methylation | details |
| TreatCFM000555 | S-adenosylmethionine-dependent methyltransferase activity methylation | details |
| TreatCFM000578 | xyloglucan biosynthetic process fucose biosynthetic process endomembrane system organization formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis | details |
| TreatCFM000616 | ATP phosphoribosyltransferase activity phospholipid transporter activity phospholipid transport thiosulfate disproportionation IV (rhodanese) histidine biosynthetic process L-histidine biosynthesis phospholipid binding ATP-binding cassette (ABC) transporter complex Sulfur metabolism chloroplast outer membrane chloroplast inner membrane Biosynthesis of amino acids | details |
| TreatCFM000781 | thiosulfate disproportionation IV (rhodanese) response to metal ion Sulfur metabolism negative regulation of endopeptidase activity ribosomal large subunit binding cysteine-type endopeptidase inhibitor activity | details |
| TreatCFM000877 | programmed cell death phosphatidic acid metabolic process positive regulation of abscisic acid-activated signaling pathway regulation of stomatal closure phospholipase D activity response to cold formation of glycosidic bonds, GlycosylTransferases: GTnc ribosome biogenesis choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases Glycerophospholipid metabolism Ribosome biogenesis in eukaryotes transferase activity, transferring acyl groups | details |
| TreatCFM000937 | thiosulfate disproportionation IV (rhodanese) ATP-binding cassette (ABC) transporter complex phosphoethanolamine phosphatase activity phosphocholine phosphatase activity phospholipid transporter activity 3-oxoacyl-[acyl-carrier-protein] synthase activity phospholipid binding phospholipid transport chloroplast outer membrane chloroplast inner membrane Sulfur metabolism Vitamin B6 metabolism Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase Fatty acid metabolism | details |
| TreatCFM000989 | CMP-3-deoxy-D-manno-octulosonate biosynthesis spermine and spermidine degradation III Lipopolysaccharide biosynthesis Arginine and proline metabolism Transcription_related, Transcription factor: LOB formation of glycosidic bonds, GlycosylTransferases: GTnc isomerase activity carbohydrate binding | details |
| TreatCFM001038 | thiosulfate disproportionation IV (rhodanese) Ubiquitin_Proteasome_system, E3 adaptor: DWD spliceosomal snRNP assembly protein import into peroxisome matrix fatty acid beta-oxidation response to UV-B Ubiquitin_Proteasome_system, E2: UBC Sulfur metabolism U4/U6 x U5 tri-snRNP complex U1 snRNP small nucleolar ribonucleoprotein complex Cul4-RING E3 ubiquitin ligase complex U5 snRNP U2 snRNP precatalytic spliceosome catalytic step 2 spliceosome viral nucleocapsid DNA repair Ubiquitin mediated proteolysis ubiquitin protein ligase binding damaged DNA binding | details |
| TreatCFM001046 | thiosulfate disproportionation IV (rhodanese) Amoebiasis stachyose biosynthesis cysteine-type endopeptidase inhibitor activity Sulfur metabolism Galactose metabolism apoplast response to stimulus formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: LOB Ubiquitin_Proteasome_system, E3 adaptor: BTB Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | details |
| TreatCFM001129 | phospholipid transport thiosulfate disproportionation IV (rhodanese) ATP-binding cassette (ABC) transporter complex phospholipid transporter activity Sulfur metabolism phospholipid binding chloroplast outer membrane chloroplast inner membrane Ubiquitin_Proteasome_system, E3 adaptor: BTB transferase activity, transferring acyl groups | details |
| TreatCFM001145 | endomembrane system organization fucose biosynthetic process xyloglucan biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth transferase activity, transferring glycosyl groups aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis endosome trans-Golgi network | details |
| TreatCFM001580 | thiosulfate disproportionation IV (rhodanese) ribonuclease H2 complex RNA-DNA hybrid ribonuclease activity clathrin adaptor complex DNA replication Lysosome Sulfur metabolism DNA replication, removal of RNA primer Mismatch repair mRNA processing RNA phosphodiester bond hydrolysis, endonucleolytic translational initiation vesicle-mediated transport | details |
Expression profiles
 Show details about module gene expression profiling |