TreatCFM000115's detailed annotation

Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
phosphatidylethanolamine biosynthesis II0.021905248plantCyc

Module member annotation

Gene IDOrtholog in Arabidopsis (Blast E-value)Annotation in Arabidopsis
CRO_T000397--
CRO_T001169AT1G66235 (5.00E-15)unknown protein
CRO_T001607--
CRO_T001889--
CRO_T002160--
CRO_T002278--
CRO_T003576--
CRO_T004340--
CRO_T004489--
CRO_T004676AT5G66560 (0)Phototropic-responsive NPH3 family protein
CRO_T005002--
CRO_T005556--
CRO_T005740--
CRO_T005845--
CRO_T006663--
CRO_T007588--
CRO_T008562AT1G42470 (0)Patched family protein
CRO_T008640--
CRO_T009180--
CRO_T009517--
CRO_T009662AT3G02100 (1.00E-101)UDP-Glycosyltransferase superfamily protein
CRO_T010634--
CRO_T010816--
CRO_T011482--
CRO_T011536--
CRO_T011937--
CRO_T011985--
CRO_T012509--
CRO_T013035--
CRO_T013114--
CRO_T013128--
CRO_T013602--
CRO_T013695--
CRO_T014009AT2G31240 (5.00E-128)Tetratricopeptide repeat (TPR)-like superfamily protein
CRO_T014294--
CRO_T015711AT5G66430 (1.00E-63)S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
CRO_T016506--
CRO_T016713--
CRO_T017413--
CRO_T017693--
CRO_T017715--
CRO_T018691--
CRO_T018970--
CRO_T019241AT3G08720 (4.00E-142)ATPK19|protein kinase 19; ATPK2|PROTEIN KINASE 2; ATS6K2|SERINE/THREONINE PROTEIN KINASE 2
CRO_T019664--
CRO_T020314--
CRO_T021043--
CRO_T021666--
CRO_T021678--
CRO_T022129AT1G15910 (8.00E-34)FDM1|factor of DNA methylation 1; IDNL1|INVOLVED IN DE NOVO 2 (IDN2) - LIKE 1; IDP1|IDN2 PARALOG 1
CRO_T022165--
CRO_T022818--
CRO_T023550AT5G05010 (0)clathrin adaptor complexes medium subunit family protein
CRO_T024006AT5G12260 (2.00E-163)
CRO_T024127AT2G38670 (8.00E-179)PECT1|phosphorylethanolamine cytidylyltransferase 1
CRO_T024716--
CRO_T024892--
CRO_T025260--
CRO_T025334--
CRO_T026136--
CRO_T026332--
CRO_T026795--
CRO_T026995--
CRO_T027804--
CRO_T028393--
CRO_T029960--
CRO_T030261--
CRO_T030786--
CRO_T031399AT4G01990 (7.00E-61)Tetratricopeptide repeat (TPR)-like superfamily protein
CRO_T031519--
CRO_T032065--
CRO_T032192--
CRO_T032278--
CRO_T032640--
CRO_T033023--

Direct connection functional modules

Module IDFunction AnnotationOverlap condition
TreatCFM000003details
TreatCFM000023Transcription_related, Transcription regulator: DDT
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
intracellular protein transport
details
TreatCFM000028hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
vacuolar proton-transporting V-type ATPase complex assembly
nitrogen compound metabolic process
retrograde transport, endosome to Golgi
endoplasmic reticulum-Golgi intermediate compartment membrane
details
TreatCFM000032details
TreatCFM000035details
TreatCFM000051phosphatidylethanolamine biosynthesis II
ethanolamine-phosphate cytidylyltransferase activity
lipid transporter activity
ErbB signaling pathway
Lysosome
Glycerophospholipid metabolism
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase
details
TreatCFM000056hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase
nitrogen compound metabolic process
transferase activity, transferring acyl groups
intracellular protein transport
details
TreatCFM000091ethanolamine-phosphate cytidylyltransferase activity
integral component of mitochondrial outer membrane
phosphatidylethanolamine biosynthesis II
biosynthetic process
Glycerophospholipid metabolism
details
TreatCFM000095defense response, incompatible interaction
activation of MAPK activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
lipid transport
MAP kinase kinase activity
lipid transporter activity
Base excision repair
Lysosome
MAPK cascade
MAP kinase activity
details
TreatCFM000104integral component of mitochondrial outer membrane
nucleolar ribonuclease P complex
auxin catabolic process
details
TreatCFM000129pyrimidine ribonucleosides salvage I
mitochondrial respiratory chain
details
TreatCFM000139formation of glycosidic bonds, GlycosylTransferases: GTnc
regulation of embryonic development
protein N-glycosylation (eukaryotic, high mannose)
glycyl-tRNA aminoacylation
glycine-tRNA ligase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
Aminoacyl-tRNA biosynthesis
N-Glycan biosynthesis
transferase activity, transferring hexosyl groups
small GTPase mediated signal transduction
embryo development ending in seed dormancy
transferase activity, transferring acyl groups
details
TreatCFM000141ethanolamine-phosphate cytidylyltransferase activity
integral component of mitochondrial outer membrane
phosphatidylethanolamine biosynthesis II
biosynthetic process
Glycerophospholipid metabolism
details
TreatCFM000175lipid IVA biosynthesis
mitochondrial respiratory chain
AP-5 adaptor complex
details
TreatCFM000181ethanolamine-phosphate cytidylyltransferase activity
endomembrane system organization
xyloglucan biosynthetic process
fucose biosynthetic process
integral component of Golgi membrane
integral component of mitochondrial outer membrane
salicylic acid mediated signaling pathway
unidimensional cell growth
phosphatidylethanolamine biosynthesis II
xyloglucan biosynthesis
aerobic respiration I (cytochrome c)
aerobic respiration III (alternative oxidase pathway)
NAD/NADH phosphorylation and dephosphorylation
biosynthetic process
transferase activity, transferring glycosyl groups
Lysine degradation
Glycerophospholipid metabolism
formation of glycosidic bonds, GlycosylTransferases: GTnc
Ubiquitin_Proteasome_system, E3 adaptor: BTB
Ubiquitin_Proteasome_system, E3 adaptor: SKP1
details
TreatCFM000189hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
Plant hormone signal transduction
Ubiquitin_Proteasome_system, E3 adaptor: F-box
details
TreatCFM000202hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Protein_kinases_phosphatases, PPC:1.10.1: Receptor Like Cytoplasmic Kinase VI
nitrogen compound metabolic process
transferase activity, transferring acyl groups
methyltransferase activity
methylation
details
TreatCFM000223ethanolamine-phosphate cytidylyltransferase activity
integral component of mitochondrial outer membrane
phosphatidylethanolamine biosynthesis II
biosynthetic process
Ubiquitin_Proteasome_system, E3 adaptor: BTB
Ubiquitin_Proteasome_system, E3 adaptor: SKP1
Lysine degradation
Glycerophospholipid metabolism
details
TreatCFM000224ethanolamine-phosphate cytidylyltransferase activity
integral component of mitochondrial outer membrane
phosphatidylethanolamine biosynthesis II
biosynthetic process
Glycerophospholipid metabolism
details
TreatCFM000227ErbB signaling pathway
Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase
metabolic process
Fatty acid metabolism
details
TreatCFM000234hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000252hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
intracellular protein transport
details
TreatCFM000255HTLV-I infection
Transcription_related, Transcription factor: NF-YC
Ubiquitin_Proteasome_system, E3 adaptor: BTB
details
TreatCFM000257formation of glycosidic bonds, GlycosylTransferases: GTnc
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
protein N-glycosylation (eukaryotic, high mannose)
gene silencing by RNA
nitrogen compound metabolic process
N-Glycan biosynthesis
transferase activity, transferring hexosyl groups
transferase activity, transferring acyl groups
details
TreatCFM000272xyloglucan biosynthetic process
endomembrane system organization
cellular response to gravity
fucose biosynthetic process
details
TreatCFM000274non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
Purine metabolism
intracellular protein transport
details
TreatCFM000278cellular component organization
Homologous recombination
single-organism cellular process
lipid transporter activity
MAP kinase kinase activity
activation of MAPK activity
defense response, incompatible interaction
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
cellular response to DNA damage stimulus
MAP kinase activity
lipid transport
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
MAPK cascade
DNA metabolic process
MAPK signaling pathway - plant
DNA repair
details
TreatCFM000280defense response, incompatible interaction
activation of MAPK activity
lipid transporter activity
MAP kinase kinase activity
MAP kinase activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
lipid transport
MAPK cascade
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
MAPK signaling pathway - plant
details
TreatCFM000319endomembrane system organization
fucose biosynthetic process
defense response, incompatible interaction
activation of MAPK activity
xyloglucan biosynthetic process
lipid transporter activity
MAP kinase kinase activity
MAP kinase activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
lipid transport
salicylic acid mediated signaling pathway
aerobic respiration I (cytochrome c)
aerobic respiration III (alternative oxidase pathway)
NAD/NADH phosphorylation and dephosphorylation
xyloglucan biosynthesis
unidimensional cell growth
MAPK cascade
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
formation of glycosidic bonds, GlycosylTransferases: GTnc
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
details
TreatCFM000330ethanolamine-phosphate cytidylyltransferase activity
phosphatidylethanolamine biosynthesis II
integral component of mitochondrial outer membrane
Glycerophospholipid metabolism
biosynthetic process
serine-type endopeptidase activity
cell wall
details
TreatCFM000332hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000351lipid transporter activity
lipid transport
Lysosome
details
TreatCFM0003753-hydroxyacyl-CoA dehydrogenase activity
fatty acid metabolic process
unsaturated, even numbered fatty acid β-oxidation
fatty acid β-oxidation II (peroxisome)
Fatty acid metabolism
very long chain fatty acid biosynthesis II
formation of glycosidic bonds, GlycosylTransferases: GTnc
jasmonic acid biosynthesis
ribosome biogenesis
transferase activity, transferring acyl groups
metal ion binding
Ribosome biogenesis in eukaryotes
details
TreatCFM000380sulfotransferase activity
lipid transporter activity
lipid transport
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
details
TreatCFM0003819-cis-epoxycarotenoid dioxygenase activity
lipid transporter activity
protein N-glycosylation (eukaryotic, high mannose)
formation of glycosidic bonds, GlycosylTransferases: GTnc
lipid transport
details
TreatCFM000384hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000396hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Glycerolipid metabolism
phospholipid remodeling (phosphatidylcholine, yeast)
O-acyltransferase activity
lipase activity
diacylglycerol and triacylglycerol biosynthesis
nitrogen compound metabolic process
lipid metabolic process
small GTPase mediated signal transduction
transferase activity, transferring acyl groups
details
TreatCFM000400lipid transporter activity
lipid transport
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
Transcription_related, Transcription factor: B3
details
TreatCFM000422hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
small GTPase mediated signal transduction
transferase activity, transferring acyl groups
details
TreatCFM000434ADP dimethylallyltransferase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
ATP dimethylallyltransferase activity
details
TreatCFM000447activation of MAPK activity
defense response, incompatible interaction
MAP kinase kinase activity
lipid transporter activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
lipid transport
MAP kinase activity
MAPK cascade
Lysosome
Sesquiterpenoid and triterpenoid biosynthesis
isomerase activity
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
MAPK signaling pathway - plant
details
TreatCFM000462phosphatidylethanolamine biosynthesis II
Cytochrome_P450, Cytochrome P450: CYP71B
ethanolamine-phosphate cytidylyltransferase activity
integral component of mitochondrial outer membrane
Glycerophospholipid metabolism
biosynthetic process
details
TreatCFM000474defense response, incompatible interaction
activation of MAPK activity
lipid transporter activity
structural constituent of cell wall
MAP kinase kinase activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
MAP kinase activity
lipid transport
MAPK cascade
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
MAPK signaling pathway - plant
details
TreatCFM000492hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
Oxidative phosphorylation
details
TreatCFM000495ethanolaminephosphotransferase activity
diacylglycerol cholinephosphotransferase activity
phosphatidyltransferase activity
phosphatidylethanolamine biosynthetic process
ErbB signaling pathway
diacylglycerol biosynthesis (PUFA enrichment in oilseed)
phosphatidylcholine biosynthesis I
phosphatidylcholine biosynthesis II
phosphatidylethanolamine biosynthesis II
choline biosynthesis III
Glycerophospholipid metabolism
Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase
Transcription_related, Transcription factor: NAC
details
TreatCFM000518alkaloid biosynthetic process
nitrogen compound metabolic process
ajmaline and sarpagine biosynthesis
vomilenine glucosyltransferase activity
strictosidine beta-glucosidase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
raucaffricine beta-glucosidase activity
phospholipid binding
details
TreatCFM000528hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Fatty acid metabolism
nitrogen compound metabolic process
plastid
transferase activity, transferring acyl groups
ligase activity
details
TreatCFM000551phospholipase D activity
N-acylphosphatidylethanolamine-specific phospholipase D activity
lipid transporter activity
phosphatidylcholine metabolic process
lipid catabolic process
lipid transport
choline biosynthesis III
phosphatidate metabolism, as a signaling molecule
phospholipases
Glycerophospholipid metabolism
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
details
TreatCFM000552Cytochrome_P450, Cytochrome P450: CYP85A
ribonuclease H2 complex
lipid transporter activity
N-acylphosphatidylethanolamine-specific phospholipase D activity
RNA-DNA hybrid ribonuclease activity
myo-inositol:proton symporter activity
phospholipase D activity
choline biosynthesis III
phosphatidate metabolism, as a signaling molecule
phospholipases
RNA catabolic process
phosphatidylcholine metabolic process
myo-inositol transport
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
Brassinosteroid biosynthesis
DNA replication
Glycerophospholipid metabolism
Lysosome
sterol metabolic process
glucose import
glucose transmembrane transport
brassinosteroid homeostasis
brassinosteroid biosynthetic process
lipid catabolic process
lipid transport
proton transport
details
TreatCFM000562phosphatidylethanolamine biosynthesis II
ethanolamine-phosphate cytidylyltransferase activity
lipid transporter activity
Glycerophospholipid metabolism
Lysosome
lipid transport
integral component of mitochondrial outer membrane
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
biosynthetic process
serine-type endopeptidase activity
details
TreatCFM000604hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
details
TreatCFM000605hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000618dUDP biosynthetic process
dTDP biosynthetic process
dTTP biosynthetic process
thymidylate kinase activity
ethanolamine-phosphate cytidylyltransferase activity
details
TreatCFM000619hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000647Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
MAP kinase kinase activity
lipid transporter activity
activation of MAPK activity
defense response, incompatible interaction
MAP kinase activity
embryo sac development
lipid transport
mRNA processing
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
MAPK cascade
rRNA processing
MAPK signaling pathway - plant
RNA processing
details
TreatCFM000666beta-N-acetylhexosaminidase activity
UDP-glucosyltransferase activity
hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc
Amino sugar and nucleotide sugar metabolism
phosphoenolpyruvate carboxykinase (ATP) activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
sulfotransferase activity
gluconeogenesis I
Cutin, suberine and wax biosynthesis
details
TreatCFM000669ErbB signaling pathway
Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase
details
TreatCFM000672nitrogen compound metabolic process
Transcription_related, Transcription regulator: DDT
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
plastid
transferase activity, transferring acyl groups
details
TreatCFM000673hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000675adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
endomembrane system organization
fucose biosynthetic process
xyloglucan biosynthetic process
defense response, incompatible interaction
activation of MAPK activity
MAP kinase kinase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
cell wall macromolecule catabolic process
details
TreatCFM000701endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
small-subunit processome assembly
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ubiquitin_Proteasome_system, DUB: OTU
details
TreatCFM000712ethanolamine-phosphate cytidylyltransferase activity
integral component of mitochondrial outer membrane
phosphatidylethanolamine biosynthesis II
biosynthetic process
Glycerophospholipid metabolism
details
TreatCFM000753details
TreatCFM000759thiosulfate disproportionation IV (rhodanese)
Sulfur metabolism
Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase
details
TreatCFM000773defense response, incompatible interaction
activation of MAPK activity
lipid transporter activity
MAP kinase kinase activity
MAP kinase activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
lipid transport
MAPK cascade
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
MAPK signaling pathway - plant
details
TreatCFM000778ethanolamine-phosphate cytidylyltransferase activity
phosphatidylethanolamine biosynthesis II
integral component of mitochondrial outer membrane
Glycerophospholipid metabolism
biosynthetic process
serine-type endopeptidase activity
cell wall
details
TreatCFM000787hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
Transcription_related, Transcription regulator: SNF2
Homologous recombination
transferase activity, transferring acyl groups
plastid
details
TreatCFM000813hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000814hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM000851AP-5 adaptor complex
Protein_kinases_phosphatases, PPC:1.13.4: Leucine Rich Repeat Kinase III
details
TreatCFM000875fucose biosynthetic process
endomembrane system organization
xyloglucan biosynthetic process
Lysosome
lipid transporter activity
lipid transport
salicylic acid mediated signaling pathway
unidimensional cell growth
aerobic respiration I (cytochrome c)
aerobic respiration III (alternative oxidase pathway)
NAD/NADH phosphorylation and dephosphorylation
xyloglucan biosynthesis
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
formation of glycosidic bonds, GlycosylTransferases: GTnc
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
integral component of Golgi membrane
details
TreatCFM000877programmed cell death
phosphatidic acid metabolic process
positive regulation of abscisic acid-activated signaling pathway
regulation of stomatal closure
phospholipase D activity
response to cold
formation of glycosidic bonds, GlycosylTransferases: GTnc
ribosome biogenesis
choline biosynthesis III
phosphatidate metabolism, as a signaling molecule
phospholipases
Glycerophospholipid metabolism
Ribosome biogenesis in eukaryotes
transferase activity, transferring acyl groups
details
TreatCFM000886activation of MAPK activity
defense response, incompatible interaction
MAP kinase kinase activity
lipid transporter activity
MAP kinase activity
lipid transport
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
MAPK cascade
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
Transcription_related, Transcription factor: B3
MAPK signaling pathway - plant
details
TreatCFM000897hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
Carbon metabolism
details
TreatCFM000900Glycerophospholipid metabolism
ethanolamine-phosphate cytidylyltransferase activity
integral component of mitochondrial outer membrane
phosphatidylethanolamine biosynthesis II
biosynthetic process
details
TreatCFM000911ethanolamine-phosphate cytidylyltransferase activity
xyloglucan biosynthetic process
endomembrane system organization
fucose biosynthetic process
formation of glycosidic bonds, GlycosylTransferases: GTnc
integral component of mitochondrial outer membrane
integral component of Golgi membrane
Glycerophospholipid metabolism
salicylic acid mediated signaling pathway
unidimensional cell growth
phosphatidylethanolamine biosynthesis II
xyloglucan biosynthesis
aerobic respiration I (cytochrome c)
aerobic respiration III (alternative oxidase pathway)
NAD/NADH phosphorylation and dephosphorylation
biosynthetic process
transferase activity, transferring glycosyl groups
details
TreatCFM000912details
TreatCFM000943lipid transporter activity
lipid transport
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
details
TreatCFM000958lipid transporter activity
lipid transport
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
details
TreatCFM000959ethanolamine-phosphate cytidylyltransferase activity
phosphatidylethanolamine biosynthesis II
integral component of mitochondrial outer membrane
Glycerophospholipid metabolism
biosynthetic process
serine-type endopeptidase activity
details
TreatCFM000962lipid transporter activity
lipid transport
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
Transcription_related, Transcription factor: B3
details
TreatCFM000976defense response, incompatible interaction
activation of MAPK activity
lipid transporter activity
MAP kinase kinase activity
MAP kinase activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
lipid transport
MAPK cascade
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
MAPK signaling pathway - plant
details
TreatCFM000989CMP-3-deoxy-D-manno-octulosonate biosynthesis
spermine and spermidine degradation III
Lipopolysaccharide biosynthesis
Arginine and proline metabolism
Transcription_related, Transcription factor: LOB
formation of glycosidic bonds, GlycosylTransferases: GTnc
isomerase activity
carbohydrate binding
details
TreatCFM001014hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM001015hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM001046thiosulfate disproportionation IV (rhodanese)
Amoebiasis
stachyose biosynthesis
cysteine-type endopeptidase inhibitor activity
Sulfur metabolism
Galactose metabolism
apoplast
response to stimulus
formation of glycosidic bonds, GlycosylTransferases: GTnc
Transcription_related, Transcription factor: LOB
Ubiquitin_Proteasome_system, E3 adaptor: BTB
Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII
details
TreatCFM001088hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Lipoic acid metabolism
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
Ubiquitin_Proteasome_system, E3 adaptor: F-box
Plant hormone signal transduction
details
TreatCFM001129phospholipid transport
thiosulfate disproportionation IV (rhodanese)
ATP-binding cassette (ABC) transporter complex
phospholipid transporter activity
Sulfur metabolism
phospholipid binding
chloroplast outer membrane
chloroplast inner membrane
Ubiquitin_Proteasome_system, E3 adaptor: BTB
transferase activity, transferring acyl groups
details
TreatCFM001145endomembrane system organization
fucose biosynthetic process
xyloglucan biosynthetic process
formation of glycosidic bonds, GlycosylTransferases: GTnc
integral component of Golgi membrane
salicylic acid mediated signaling pathway
unidimensional cell growth
transferase activity, transferring glycosyl groups
aerobic respiration I (cytochrome c)
aerobic respiration III (alternative oxidase pathway)
NAD/NADH phosphorylation and dephosphorylation
xyloglucan biosynthesis
endosome
trans-Golgi network
details
TreatCFM001146details
TreatCFM001154nitrogen compound metabolic process
heme transport
cytochrome complex assembly
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Transcription_related, Transcription factor: M-type
heme transporter activity
transferase activity, transferring acyl groups
details
TreatCFM001179hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
small GTPase mediated signal transduction
transferase activity, transferring acyl groups
details
TreatCFM001196hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM001202hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM001206Ubiquitin_Proteasome_system, DUB: JAMM
cullin deneddylation
COP9 signalosome
nitrogen compound metabolic process
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Phenylpropanoid biosynthesis
plastid
coenzyme binding
transferase activity, transferring acyl groups
details
TreatCFM001224lipid transporter activity
Lysosome
lipid transport
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
peptidase activity
aspartic-type endopeptidase activity
lipid metabolic process
details
TreatCFM001234hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM001272phosphatidylethanolamine biosynthesis II
ethanolamine-phosphate cytidylyltransferase activity
peptide metabolic process
Noc complex
integral component of mitochondrial outer membrane
nuclear lumen
details
TreatCFM001350hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM001354hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
nucleic acid metabolic process
plastid
transferase activity, transferring acyl groups
details
TreatCFM001491lipid transporter activity
plasmodesma
Hedgehog signaling pathway
lipid transport
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
Ubiquitin_Proteasome_system, E3 adaptor: BTB
transporter activity
details
TreatCFM001493activation of MAPK activity
defense response, incompatible interaction
fucose biosynthetic process
xyloglucan biosynthetic process
endomembrane system organization
Ribosome
MAP kinase kinase activity
lipid transporter activity
Protein_kinases_phosphatases, PPC:4.1.4: MAP2K
structural constituent of ribosome
5S rRNA binding
MAP kinase activity
translation
lipid transport
salicylic acid mediated signaling pathway
unidimensional cell growth
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
formation of glycosidic bonds, GlycosylTransferases: GTnc
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
integral component of Golgi membrane
MAPK cascade
aerobic respiration I (cytochrome c)
aerobic respiration III (alternative oxidase pathway)
detoxification of reactive carbonyls in chloroplasts
Flavonoid biosynthesis
flavonoid biosynthesis (in equisetum)
leucodelphinidin biosynthesis
NAD/NADH phosphorylation and dephosphorylation
pinobanksin biosynthesis
xyloglucan biosynthesis
Lysosome
single-organism metabolic process
details
TreatCFM001507hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
RNA polymerase II regulatory region sequence-specific DNA binding
regulation of transcription from RNA polymerase II promoter
transferase activity, transferring acyl groups
details
TreatCFM001562lipid transporter activity
Ether lipid metabolism
lipid transport
Transcriptional misregulation in cancers
Lysosome
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
details
TreatCFM001624hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
Oxidative phosphorylation
details
TreatCFM001704Ubiquitin_Proteasome_system, DUB: JAMM
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
RNA polymerase II transcription factor activity, sequence-specific DNA binding
cullin deneddylation
ribosomal large subunit assembly
nitrogen compound metabolic process
COP9 signalosome
nucleoplasm
transferase activity, transferring acyl groups
details
TreatCFM001790lipid transport
Lysosome
lipid transporter activity
adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57
Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII
Transcription_related, Transcription factor: NAC
details
TreatCFM001792hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
nitrogen compound metabolic process
transferase activity, transferring acyl groups
plastid
details
TreatCFM002083L-glutamate biosynthesis I
Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase
trans-lycopene biosynthesis II (plants)
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
heme biosynthesis I (aerobic)
L-glutamine degradation I
COPI vesicle coat
retrograde vesicle-mediated transport, Golgi to ER
protein transport
details

Expression profiles


Show details about module gene expression profiling
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