TreatCFM000810's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:1.3.7: Receptor like protein kinase/Receptor lectin kinase like protein | 0.002275481 | kinase family |
| CDP-diacylglycerol biosynthesis II | 0.007960653 | plantCyc |
| CDP-diacylglycerol biosynthesis I | 0.009084188 | plantCyc |
| xylogalacturonan biosynthesis | 0.009084188 | plantCyc |
| phosphatidylglycerol biosynthetic process | 0.012835307 | GO:0006655 |
| plant-type cell wall modification involved in multidimensional cell growth | 0.012835307 | GO:0009831 |
| CDP-diacylglycerol biosynthetic process | 0.012835307 | GO:0016024 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.013234862 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.013234862 | cazy family |
| Fanconi anemia pathway | 0.016100932 | KEGG pathway |
| Glycerophospholipid metabolism | 0.01729342 | KEGG pathway |
| calcium-transporting ATPase activity | 0.024552505 | GO:0005388 |
| phosphatidate cytidylyltransferase activity | 0.024552505 | GO:0004605 |
| glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity | 0.024552505 | GO:0050508 |
| calcium ion transmembrane transport | 0.034615408 | GO:0070588 |
| defense response to fungus | 0.035121243 | GO:0050832 |
| cell wall biogenesis | 0.035121243 | GO:0042546 |
| xyloglucan metabolic process | 0.035121243 | GO:0010411 |
| plant-type cell wall organization | 0.035517075 | GO:0009664 |
| xyloglucan:xyloglucosyl transferase activity | 0.040713291 | GO:0016762 |
| hydrogen peroxide catabolic process | 0.043462453 | GO:0042744 |
| metal ion binding | 0.047114861 | GO:0046872 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007720 | AT5G25310 (3.00E-141) | Exostosin family protein |
| CRO_T009691 | AT2G37130 (2.00E-121) | Peroxidase superfamily protein |
| CRO_T019721 | AT3G22910 (0) | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
| CRO_T025592 | - | - |
| CRO_T030450 | AT1G62430 (2.00E-169) | ATCDS1|CDP-diacylglycerol synthase 1 |
| CRO_T030678 | AT3G19340 (0) | Protein of unknown function (DUF3754) |
| CRO_T031675 | AT2G06850 (1.00E-54) | EXGT-A1|endoxyloglucan transferase A1; EXT|ENDOXYLOGLUCAN TRANSFERASE; XTH4|xyloglucan endotransglucosylase/hydrolase 4 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000259 | Oxidative phosphorylation ATP synthesis coupled proton transport proton-transporting ATPase activity, rotational mechanism hydrogen ion transmembrane transporter activity proton-transporting ATP synthase activity, rotational mechanism proton-transporting ATP synthase complex, catalytic core F(1) ATP hydrolysis coupled proton transport Progesterone-mediated oocyte maturation Protein_kinases_phosphatases, PPC:1.3.7: Receptor like protein kinase/Receptor lectin kinase like protein mitochondrion methyl indole-3-acetate esterase activity ketol-acid reductoisomerase activity photosynthetic acclimation indoleacetic acid conjugate metabolic process ATPase activity, coupled to transmembrane movement of ions, rotational mechanism valine biosynthetic process phosphatidylglycerol biosynthetic process CDP-diacylglycerol biosynthesis II L-valine biosynthesis methyl indole-3-acetate interconversion CDP-diacylglycerol biosynthetic process phosphatidate cytidylyltransferase activity | details |
| TreatCFM000696 | 3-phosphoinositide biosynthesis endoplasmic reticulum tubular network organization clathrin-mediated endocytosis plant-type cell wall modification involved in multidimensional cell growth hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc D-myo-inositol (1,4,5)-trisphosphate biosynthesis D-myo-inositol (1,4,5)-trisphosphate degradation apical plasma membrane endoplasmic reticulum tubular network phosphatidylinositol dephosphorylation calcium ion transmembrane transport cell wall biogenesis xyloglucan metabolic process phosphatidylinositol phosphorylation calcium-transporting ATPase activity cation binding 1-phosphatidylinositol-4-phosphate 5-kinase activity hydrolase activity Fanconi anemia pathway Inositol phosphate metabolism pollen tube | details |
| TreatCFM000925 | Focal adhesion xylogalacturonan biosynthesis plant-type cell wall modification involved in multidimensional cell growth Fanconi anemia pathway Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc calcium ion transmembrane transport cell wall biogenesis xyloglucan metabolic process calcium-transporting ATPase activity DNA topoisomerase type I activity glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity motor activity myosin complex actin binding xyloglucan:xyloglucosyl transferase activity | details |
| TreatCFM001288 | Protein_kinases_phosphatases, PPC:1.3.7: Receptor like protein kinase/Receptor lectin kinase like protein Progesterone-mediated oocyte maturation virus induced gene silencing posttranscriptional gene silencing by RNA cytoskeleton scopoletin biosynthesis chlorogenic acid biosynthesis I Phenylpropanoid biosynthesis phenylpropanoids methylation (ice plant) suberin monomers biosynthesis defense response to fungus plant-type cell wall organization hydrogen peroxide catabolic process O-methyltransferase activity | details |
Expression profiles
 Show details about module gene expression profiling |