TreatCFM000904's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| peroxisomal importomer complex | 0.001063908 | GO:1990429 |
| integral component of peroxisomal membrane | 0.001595391 | GO:0005779 |
| D-myo-inositol-5-phosphate metabolism | 0.003454893 | plantCyc |
| phytate degradation I | 0.003454893 | plantCyc |
| protein C-terminus binding | 0.004048762 | GO:0008022 |
| protein monoubiquitination | 0.00521084 | GO:0006513 |
| embryonic morphogenesis | 0.00521084 | GO:0048598 |
| protein import into peroxisome matrix | 0.00521084 | GO:0016558 |
| fatty acid beta-oxidation | 0.00521084 | GO:0006635 |
| peptidyl-tyrosine dephosphorylation | 0.009892553 | GO:0035335 |
| Glycolysis / Gluconeogenesis | 0.015873854 | KEGG pathway |
| Inositol phosphate metabolism | 0.015873854 | KEGG pathway |
| Peroxisome | 0.015873854 | KEGG pathway |
| protein tyrosine phosphatase activity | 0.020201974 | GO:0004725 |
| acid phosphatase activity | 0.020201974 | GO:0003993 |
| dephosphorylation | 0.0358425 | GO:0016311 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000277 | AT3G10550 (5.00E-92) | AtMTM1|myotubularin 1 |
| CRO_T012370 | AT5G19970 (1.00E-67) | unknown protein |
| CRO_T015715 | AT3G04460 (2.00E-153) | APM4|ABERRANT PEROXISOME MORPHOLOGY 4; ATPEX12|PEROXIN-12 |
| CRO_T017513 | AT2G45430 (7.00E-53) | AHL22|AT-hook motif nuclear-localized protein 22 |
| CRO_T025439 | AT1G09870 (0) | histidine acid phosphatase family protein |
| CRO_T029801 | AT5G45310 (1.00E-37) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000982 | D-myo-inositol-5-phosphate metabolism phytate degradation I Transcription_related, Transcription regulator: PHD peptidyl-tyrosine dephosphorylation Glycolysis / Gluconeogenesis Inositol phosphate metabolism Plant-pathogen interaction protein tyrosine phosphatase activity acid phosphatase activity dephosphorylation | details |
| TreatCFM001186 | formation of glycosidic bonds, GlycosylTransferases: GTnc Various types of N-glycan biosynthesis Lewis a epitope biosynthetic process L-methionine biosynthetic process from S-adenosylmethionine fucosylation S-methyl-5-thio-α-D-ribose 1-phosphate degradation adenosine ribonucleotides de novo biosynthesis L-methionine biosynthetic process from methylthioadenosine fucosyltransferase activity ribosomal small subunit assembly S-methyl-5-thioribose-1-phosphate isomerase activity plant-type vacuole Golgi cisterna membrane protein glycosylation Ubiquitin_Proteasome_system, E3: U-box Cysteine and methionine metabolism | details |
Expression profiles
 Show details about module gene expression profiling |