TreatCFM000942's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Fanconi anemia pathway | 0.022030662 | KEGG pathway |
| Peroxisome | 0.022030662 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase | 0.027546152 | kinase family |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.030443957 | cazy family |
| Plant-pathogen interaction | 0.032687791 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001591 | - | - |
| CRO_T007952 | AT3G16210 (9.00E-15) | F-box family protein |
| CRO_T020468 | AT3G21630 (0) | CERK1|chitin elicitor receptor kinase 1; LYK1|LysM-containing receptor-like kinase 1; LYSM RLK1|LYSM DOMAIN RECEPTOR-LIKE KINASE 1 |
| CRO_T022142 | AT5G43140 (5.00E-18) | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| CRO_T026909 | AT5G43210 (9.00E-33) | Excinuclease ABC, C subunit, N-terminal |
| CRO_T028917 | - | - |
| CRO_T031789 | AT3G46710 (1.00E-34) | NB-ARC domain-containing disease resistance protein |
| CRO_T033001 | AT3G24840 (3.00E-16) | Sec14p-like phosphatidylinositol transfer family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000109 | C-5 methylation of cytosine cellular response to heat lysyl-tRNA aminoacylation DNA methylation on cytosine within a CHH sequence glutaminyl-tRNAgln biosynthesis via transamidation ajmaline and sarpagine biosynthesis lysine-tRNA ligase activity DNA (cytosine-5-)-methyltransferase activity carbon-nitrogen ligase activity, with glutamine as amido-N-donor small GTPase mediated signal transduction | details |
| TreatCFM001226 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor peptidase activity aspartic-type endopeptidase activity peroxidase activity | details |
| TreatCFM001468 | Protein_kinases_phosphatases, PPC:4.5.1.1: Male grem cell-associated kinase (mak) L-glutamine degradation I L-histidine biosynthesis ligase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity oxo-acid-lyase activity galactosylxylosylprotein 3-beta-galactosyltransferase activity imidazoleglycerol-phosphate synthase activity protein O-linked glycosylation via hydroxyproline arabinogalactan protein metabolic process Transcription_related, Transcription factor: MIKC formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001882 | Ubiquitin_Proteasome_system, E1: ThiF tetrapyrrole biosynthesis I (from glutamate) regulation of actin filament polymerization alanyl-tRNA aminoacylation Ser-tRNA(Ala) hydrolase activity glutamyl-tRNA reductase activity alanine-tRNA ligase activity protoporphyrinogen IX biosynthetic process regulation of translational fidelity phospholipid translocation actin cytoskeleton very long chain fatty acid biosynthesis I phospholipid-translocating ATPase activity tRNA binding Fatty acid elongation Porphyrin and chlorophyll metabolism | details |
Expression profiles
 Show details about module gene expression profiling |