TreatCFM001081's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| proteolysis | 0.000871175 | GO:0006508 |
| Glutathione metabolism | 0.007954002 | KEGG pathway |
| metallopeptidase activity | 0.008859354 | GO:0008237 |
| carboxypeptidase activity | 0.008859354 | GO:0004180 |
| carbohydrate binding | 0.042583618 | GO:0030246 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.042670298 | cazy family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T017833 | AT2G13600 (2.00E-101) | SLO2|SLOW GROWTH 2 |
| CRO_T018850 | AT1G63770 (0) | Peptidase M1 family protein |
| CRO_T023221 | AT2G17350 (4.00E-43) | unknown protein |
| CRO_T027644 | AT1G63130 (8.00E-50) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T029517 | AT5G61800 (3.00E-70) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T033553 | AT3G62360 (0) | Carbohydrate-binding-like fold |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000651 | N-Glycan biosynthesis fatty acid β-oxidation II (peroxisome) unsaturated, even numbered fatty acid β-oxidation carboxypeptidase activity dolichyl-diphosphooligosaccharide-protein glycotransferase activity very long chain fatty acid biosynthesis II lignin biosynthetic process lignin catabolic process protein N-linked glycosylation via asparagine Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 oligosaccharyltransferase complex hydroquinone:oxygen oxidoreductase activity oxidoreductase activity, oxidizing metal ions | details |
| TreatCFM001009 | metallopeptidase activity Glutathione metabolism adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 alpha-glucan, water dikinase activity ATPase activator activity 6-phosphofructokinase complex cold acclimation positive regulation of ATPase activity fructose 6-phosphate metabolic process glycolytic process through fructose-6-phosphate proteolysis starch catabolic process 6-phosphofructokinase activity protein histidine kinase activity peptidyl-histidine phosphorylation chaperone binding glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) zinc ion binding response to stress metal ion binding | details |
| TreatCFM001080 | Protein_kinases_phosphatases, PPC:4.5.3: Casein Kinase II Family response to ionizing radiation mitotic recombination strand invasion DNA recombinase assembly protein phosphorylation Protein_kinases_phosphatases, PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) four-way junction DNA binding ATP binding recombinase activity DNA-dependent ATPase activity endodeoxyribonuclease activity metallopeptidase activity protein serine/threonine kinase activity single-stranded DNA binding double-stranded DNA binding Glutathione metabolism Homologous recombination NF-kappa B signaling pathway Ribosome biogenesis in eukaryotes | details |
| TreatCFM001794 | proteolysis carboxypeptidase activity Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) | details |
Expression profiles
 Show details about module gene expression profiling |