TreatCFM001132's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Longevity regulating pathway - worm | 0.005849335 | KEGG pathway |
| protein import into mitochondrial matrix | 0.011949002 | GO:0030150 |
| integral component of mitochondrial inner membrane | 0.013651455 | GO:0031305 |
| mitochondrial inner membrane presequence translocase complex | 0.013651455 | GO:0005744 |
| positive regulation of GTPase activity | 0.017070334 | GO:0043547 |
| protein channel activity | 0.046856699 | GO:0015266 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005711 | - | - |
| CRO_T017287 | AT1G59780 (2.00E-55) | NB-ARC domain-containing disease resistance protein |
| CRO_T018342 | - | - |
| CRO_T019104 | AT3G15395 (2.00E-15) | unknown protein |
| CRO_T021791 | AT1G72750 (9.00E-24) | ATTIM23-2|translocase inner membrane subunit 23-2 |
| CRO_T023674 | AT5G54310 (5.00E-22) | AGD5|ARF-GAP domain 5; NEV|NEVERSHED |
| CRO_T027113 | AT1G51350 (1.00E-100) | ARM repeat superfamily protein |
| CRO_T029631 | - | - |
| CRO_T033679 | AT1G60830 (1.00E-04) | RNA-binding (RRM/RBD/RNP motifs) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000395 | Circadian rhythm - plant positive regulation of long-day photoperiodism, flowering temperature compensation of the circadian clock response to far red light response to blue light Circadian rhythm response to hydrogen peroxide response to cold nucleoplasm negative regulation of transcription from RNA polymerase II promoter receptor-mediated endocytosis Fluorobenzoate degradation Cytochrome_P450, Cytochrome P450: CYP75B Transcription_related, Transcription factor: NF-X1 Transcription_related, Transcription regulator: Pseudo ARR-B transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding scavenger receptor activity | details |
| TreatCFM001628 | 3β-hydroxysesquiterpene lactone biosynthesis Cytochrome_P450, Cytochrome P450: CYP71A rRNA catabolic process mRNA catabolic process nuclear exosome (RNase complex) cytoplasmic exosome (RNase complex) RNA phosphodiester bond hydrolysis, exonucleolytic ABC transporters Endocytosis RNA degradation positive regulation of GTPase activity rRNA processing | details |
| TreatCFM001748 | Mitophagy - yeast Transcription_related, Transcription factor: E2F-DP Ubiquitin_Proteasome_system, DUB: USP aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation transcription factor complex cellular protein metabolic process | details |
| TreatCFM001814 | pentose phosphate pathway (non-oxidative branch) catalytic activity Rubisco shunt trehalose-phosphatase activity inorganic phosphate transmembrane transporter activity trehalose biosynthetic process anion transmembrane transport GTPase activator activity positive regulation of GTPase activity dephosphorylation ATPase activity, coupled to transmembrane movement of substances | details |
| TreatCFM001950 | small ribosomal subunit heat shock protein binding | details |
Expression profiles
 Show details about module gene expression profiling |