TreatCFM001950's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| small ribosomal subunit | 0.01804373 | GO:0015935 |
| heat shock protein binding | 0.048228493 | GO:0031072 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003329 | AT4G31390 (5.00E-173) | ABC1K1|ABC1-like kinase 1; ACDO1|ABC1-like kinase related to chlorophyll degradation and oxidative stress 1; PGR6|PROTON GRADIENT REGULATION 6 |
| CRO_T005711 | - | - |
| CRO_T014128 | - | - |
| CRO_T022420 | AT1G58380 (2.00E-119) | XW6|Ribosomal protein S5 family protein |
| CRO_T023218 | AT2G23390 (6.00E-157) | |
| CRO_T025672 | AT5G61670 (3.00E-57) | Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000173 | hesperitin glycoside biosynthesis naringenin glycoside biosynthesis acetylglucosaminyltransferase activity high-affinity secondary active ammonium transmembrane transporter activity | details |
| TreatCFM000395 | Circadian rhythm - plant positive regulation of long-day photoperiodism, flowering temperature compensation of the circadian clock response to far red light response to blue light Circadian rhythm response to hydrogen peroxide response to cold nucleoplasm negative regulation of transcription from RNA polymerase II promoter receptor-mediated endocytosis Fluorobenzoate degradation Cytochrome_P450, Cytochrome P450: CYP75B Transcription_related, Transcription factor: NF-X1 Transcription_related, Transcription regulator: Pseudo ARR-B transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding scavenger receptor activity | details |
| TreatCFM000650 | protein ubiquitination acetylglucosaminyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Ubiquitin_Proteasome_system, E3: U-box | details |
| TreatCFM001109 | uroporphyrinogen-III synthase activity tetrapyrrole biosynthetic process phospholipases Inositol phosphate metabolism | details |
| TreatCFM001132 | Longevity regulating pathway - worm protein import into mitochondrial matrix integral component of mitochondrial inner membrane mitochondrial inner membrane presequence translocase complex positive regulation of GTPase activity protein channel activity | details |
| TreatCFM001312 | Transcription_related, Transcription factor: TCP Spliceosome | details |
| TreatCFM001644 | Protein_kinases_phosphatases, PPC:1.7.1: S Domain Kinase (Type 1) Transcription_related, Transcription factor: G2-like preribosome, large subunit precursor small ribosomal subunit | details |
| TreatCFM002087 | chlorophyll a degradation II hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: G2-like Necroptosis Porphyrin and chlorophyll metabolism pheophorbide a oxygenase activity alpha-amylase activity chlorophyllide a oxygenase [overall] activity chloroplast thylakoid chloroplast defense response to bacterium, incompatible interaction fruit development cell death chlorophyll catabolic process cellular response to oxidative stress glycerol ether metabolic process flower development sulfate assimilation peptidyl-prolyl cis-trans isomerase activity aspartic-type endopeptidase activity 2 iron, 2 sulfur cluster binding oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor protein disulfide oxidoreductase activity protein catabolic process | details |
Expression profiles
 Show details about module gene expression profiling |