TreatCFM001143's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ribosome | 0.004452337 | KEGG pathway |
| Purine metabolism | 0.046541824 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003592 | - | - |
| CRO_T009997 | ATCG00180 (8.00E-89) | RPOC1|DNA-directed RNA polymerase family protein |
| CRO_T014336 | - | - |
| CRO_T019199 | - | - |
| CRO_T024490 | AT2G07675 (8.00E-33) | Ribosomal protein S12/S23 family protein |
| CRO_T028073 | - | - |
| CRO_T031271 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000153 | DNA-directed RNA polymerase activity Purine metabolism transcription, DNA-templated DNA binding endonuclease activity nucleic acid phosphodiester bond hydrolysis chloroplast | details |
| TreatCFM000345 | DNA-directed RNA polymerase activity Purine metabolism protein methyltransferase activity protein methylation Transcription_related, Transcription factor: HB | details |
| TreatCFM000879 | DNA-directed RNA polymerase activity | details |
| TreatCFM000939 | S-methyl-5-thio-α-D-ribose 1-phosphate degradation plasma membrane respiratory chain complex I L-phenylalanine:2-oxoglutarate aminotransferase activity L-aspartate:2-oxoglutarate aminotransferase activity ATP synthesis coupled electron transport biosynthetic process small ribosomal subunit mitochondrion | details |
| TreatCFM001142 | Ribosome intracellular part small ribosomal subunit | details |
| TreatCFM001384 | details |
Expression profiles
 Show details about module gene expression profiling |