TreatCFM001160's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| L-asparagine degradation I | 0.014830334 | plantCyc |
| pentose phosphate pathway (non-oxidative branch) | 0.014830334 | plantCyc |
| superpathway of aspartate and asparagine biosynthesis | 0.015270259 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.01736409 | cazy family |
| Calvin-Benson-Bassham cycle | 0.018828182 | plantCyc |
| Rubisco shunt | 0.018828182 | plantCyc |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006962 | AT3G44150 (2.00E-102) | unknown protein |
| CRO_T013445 | AT4G00590 (4.00E-50) | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
| CRO_T013918 | - | - |
| CRO_T015306 | AT4G00720 (2.00E-31) | ASKTHETA|SHAGGY-LIKE PROTEIN KINASE THETA; ATSK32|shaggy-like protein kinase 32 |
| CRO_T026456 | AT3G04880 (4.00E-116) | DRT102|DNA-DAMAGE-REPAIR/TOLERATION 2 |
| CRO_T027265 | AT4G38500 (0) | Protein of unknown function (DUF616) |
| CRO_T027827 | - | - |
| CRO_T031300 | AT1G24090 (8.00E-23) | RNase H family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM002095 | Transcription_related, Transcription factor: Alfin-like rRNA (adenine-N6,N6-)-dimethyltransferase activity pentose phosphate pathway (non-oxidative branch) rRNA methylation cell fate specification Calvin-Benson-Bassham cycle Rubisco shunt isomerase activity zinc ion binding histone binding formation of translation preinitiation complex regulation of translational initiation RNA transport cell division translation initiation factor activity eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic 43S preinitiation complex | details |
Expression profiles
 Show details about module gene expression profiling |