TreatCFM001180's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: Trihelix | 8.17E-05 | TF family |
| UMP kinase activity | 0.005631316 | GO:0033862 |
| L-tyrosine:2-oxoglutarate aminotransferase activity | 0.005631316 | GO:0004838 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.011359262 | cazy family |
| L-phenylalanine biosynthesis III (cytosolic, plants) | 0.013191593 | plantCyc |
| UTP and CTP de novo biosynthesis | 0.013191593 | plantCyc |
| xylogalacturonan biosynthesis | 0.013191593 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.013234862 | cazy family |
| pyrimidine nucleotide biosynthetic process | 0.014934737 | GO:0006221 |
| nucleotide phosphorylation | 0.014934737 | GO:0046939 |
| cellular amino acid metabolic process | 0.014934737 | GO:0006520 |
| L-phenylalanine:2-oxoglutarate aminotransferase activity | 0.016253828 | GO:0080130 |
| beta-galactosidase activity | 0.018742782 | GO:0004565 |
| pyrimidine ribonucleotides interconversion | 0.018891869 | plantCyc |
| Biosynthesis of amino acids | 0.019287112 | KEGG pathway |
| biosynthetic process | 0.026467739 | GO:0009058 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003571 | AT2G28110 (8.00E-101) | FRA8|FRAGILE FIBER 8; IRX7|IRREGULAR XYLEM 7 |
| CRO_T010438 | AT5G53970 (6.00E-131) | TAT7|tyrosine aminotransferase 7 |
| CRO_T014810 | AT2G30530 (8.00E-78) | unknown protein |
| CRO_T016548 | AT2G33550 (7.00E-84) | Homeodomain-like superfamily protein |
| CRO_T019345 | AT1G31740 (0) | BGAL15|beta-galactosidase 15 |
| CRO_T024240 | - | - |
| CRO_T030321 | AT3G18680 (1.00E-68) | Amino acid kinase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000950 | Transcription_related, Transcription factor: Trihelix UMP kinase activity L-tyrosine:2-oxoglutarate aminotransferase activity Transcription_related, Transcription factor: BBR-BPC hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: PLATZ L-phenylalanine biosynthesis III (cytosolic, plants) UTP and CTP de novo biosynthesis L-phenylalanine:2-oxoglutarate aminotransferase activity cellular amino acid metabolic process pyrimidine nucleotide biosynthetic process nucleotide phosphorylation beta-galactosidase activity pyrimidine ribonucleotides interconversion Biosynthesis of amino acids biosynthetic process | details |
| TreatCFM000951 | UMP kinase activity L-tyrosine:2-oxoglutarate aminotransferase activity Transcription_related, Transcription factor: BBR-BPC L-phenylalanine biosynthesis III (cytosolic, plants) UTP and CTP de novo biosynthesis hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: Trihelix pyrimidine nucleotide biosynthetic process mature ribosome assembly pyrimidine ribonucleotides interconversion nucleotide phosphorylation cellular amino acid metabolic process L-phenylalanine:2-oxoglutarate aminotransferase activity beta-galactosidase activity translational elongation biosynthetic process Biosynthesis of amino acids Ribosome biogenesis in eukaryotes translation elongation factor activity | details |
| TreatCFM000995 | L-tyrosine:2-oxoglutarate aminotransferase activity L-phenylalanine biosynthesis III (cytosolic, plants) phosphatidylcholine acyl editing phospholipases O-acyltransferase activity L-phenylalanine:2-oxoglutarate aminotransferase activity response to cold response to wounding response to osmotic stress cellular amino acid metabolic process response to ethylene response to water deprivation biosynthetic process Transcription_related, Transcription factor: bZIP proteasome-mediated ubiquitin-dependent protein catabolic process Biosynthesis of amino acids | details |
| TreatCFM000996 | biosynthetic process protein binding thiosulfate disproportionation IV (rhodanese) L-tyrosine:2-oxoglutarate aminotransferase activity L-phenylalanine biosynthesis III (cytosolic, plants) formation of glycosidic bonds, GlycosylTransferases: GTnc strictosidine synthase activity O-acyltransferase activity L-phenylalanine:2-oxoglutarate aminotransferase activity cellular amino acid metabolic process response to osmotic stress response to wounding trehalose biosynthetic process response to cold phosphatidylcholine acyl editing phospholipases secologanin and strictosidine biosynthesis response to ethylene Transcription_related, Transcription factor: bZIP response to water deprivation proteasome-mediated ubiquitin-dependent protein catabolic process | details |
| TreatCFM001562 | lipid transporter activity Ether lipid metabolism lipid transport Transcriptional misregulation in cancers Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
Expression profiles
 Show details about module gene expression profiling |