TreatCFM001270's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Glycosaminoglycan degradation | 0.002126245 | KEGG pathway |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.002127502 | cazy family |
| Cytochrome_P450, Cytochrome P450: CYP81D | 0.003720379 | CYP450 family |
| sesamin biosynthesis | 0.005485094 | plantCyc |
| defense response to other organism | 0.012546116 | GO:0098542 |
| indole glucosinolate metabolic process | 0.012546116 | GO:0042343 |
| secondary metabolite biosynthetic process | 0.039664391 | GO:0044550 |
| membrane | 0.040646932 | GO:0016020 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007233 | - | - |
| CRO_T008785 | AT5G13690 (4.00E-105) | CYL1|CYCLOPS 1; NAGLU|N-ACETYL-GLUCOSAMINIDASE |
| CRO_T013996 | AT1G68825 (1.00E-05) | DVL5|DEVIL 5; RTFL15|ROTUNDIFOLIA like 15 |
| CRO_T016478 | AT5G19630 (2.00E-79) | alpha/beta-Hydrolases superfamily protein |
| CRO_T030288 | AT4G25310 (6.00E-57) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T031282 | AT4G37320 (4.00E-107) | CYP81D5|cytochrome P450, family 81, subfamily D, polypeptide 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000486 | nuclear pore transmembrane ring establishment of spindle pole body localization to nuclear envelope spindle pole body duplication PSII associated light-harvesting complex II catabolic process nuclear pore organization photoinhibition regulation of apoptotic process pseudouridine synthesis thylakoid membrane organization photosystem II repair sulfiredoxin activity nucleotide binding pseudouridine synthase activity structural constituent of nuclear pore ATP-dependent peptidase activity metalloendopeptidase activity formation of glycosidic bonds, GlycosylTransferases: GTnc ATPase activity | details |
| TreatCFM000987 | Taurine and hypotaurine metabolism spindle pole body duplication establishment of spindle pole body localization to nuclear envelope flavin-containing compound metabolic process nuclear pore transmembrane ring detection of hypoxia positive regulation of ubiquitin-protein transferase activity peptidyl-cysteine oxidation anaerobic respiration nuclear pore organization pseudouridine synthesis protein neddylation FAD diphosphatase activity cullin family protein binding ubiquitin-like protein binding structural constituent of nuclear pore pseudouridine synthase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen ubiquitin conjugating enzyme binding phosphatidylcholine acyl editing phospholipases phospholipid remodeling (phosphatidylcholine, yeast) ubiquitin ligase complex ATPase activity Purine metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001269 | sesamin biosynthesis Transcription_related, Transcription factor: C2C2-CO-like Cytochrome_P450, Cytochrome P450: CYP81D indole glucosinolate metabolic process developmental process response to UV-B defense response to other organism Transcription_related, Transcription regulator: mTERF double-stranded DNA binding amino acid binding | details |
| TreatCFM001482 | Transcription_related, Transcription factor: Alfin-like mevalonate pathway I pyridoxal 5'-phosphate salvage I FAD diphosphatase activity pyridoxal kinase activity mevalonate kinase activity flavin-containing compound metabolic process peptidyl-cysteine oxidation anaerobic respiration pyridoxal 5'-phosphate salvage detection of hypoxia Taurine and hypotaurine metabolism Vitamin B6 metabolism phosphorylation zinc ion binding isoprenoid biosynthetic process | details |
| TreatCFM001975 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Glycosaminoglycan degradation geraniol kinase activity organic cyclic compound metabolic process long-chain fatty acid biosynthetic process CTP:2-trans,-6-trans-farnesol kinase activity response to molecule of fungal origin geranylgeraniol kinase activity small molecule metabolic process tocopherol cyclase activity farnesol metabolic process adenyl-nucleotide exchange factor activity sphingosine N-acyltransferase activity heterocycle metabolic process carpel development cellular lipid metabolic process Sphingolipid metabolism ceramide degradation farnesylcysteine salvage pathway vitamin E biosynthesis (tocopherols) chaperone binding Ubiquinone and other terpenoid-quinone biosynthesis Terpenoid backbone biosynthesis gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt isomerase activity nucleotidyltransferase activity regulation of catalytic activity | details |
Expression profiles
 Show details about module gene expression profiling |