TreatCFM001283's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| maturation of SSU-rRNA | 1.12E-05 | GO:0030490 |
| Ribosome biogenesis in eukaryotes | 9.52E-05 | KEGG pathway |
| small-subunit processome | 0.000509611 | GO:0032040 |
| nucleolus | 0.001040644 | GO:0005730 |
| response to cytokinin | 0.016540086 | GO:0009735 |
| thylakoid | 0.0282577 | GO:0009579 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001081 | AT4G02400 (1.00E-72) | U3 ribonucleoprotein (Utp) family protein |
| CRO_T001082 | AT4G02400 (5.00E-86) | U3 ribonucleoprotein (Utp) family protein |
| CRO_T002824 | - | - |
| CRO_T008463 | AT1G15140 (4.00E-75) | FAD/NAD(P)-binding oxidoreductase |
| CRO_T016732 | AT4G14620 (6.00E-77) | Protein of unknown function (DUF506) |
| CRO_T028804 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000488 | Ribosome biogenesis in eukaryotes CURI complex UTP-C complex maturation of SSU-rRNA ribosomal small subunit assembly rRNA processing Transcription_related, Transcription factor: HSF Transcription_related, Transcription factor: TCP transferase activity, transferring acyl groups small-subunit processome | details |
Expression profiles
 Show details about module gene expression profiling |