TreatCFM001335's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| integral component of membrane | 0.001536023 | GO:0016021 |
| oxoglutarate dehydrogenase complex | 0.001536023 | GO:0045252 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.003541648 | cazy family |
| dihydrolipoyllysine-residue succinyltransferase activity | 0.003855401 | GO:0004149 |
| GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity | 0.003855401 | GO:0004377 |
| 2-oxoglutarate decarboxylation to succinyl-CoA | 0.004785112 | plantCyc |
| protein N-glycosylation (eukaryotic, high mannose) | 0.006107988 | plantCyc |
| cyclin-dependent protein serine/threonine kinase regulator activity | 0.010276513 | GO:0016538 |
| Cell cycle - yeast | 0.01364139 | KEGG pathway |
| oligosaccharide-lipid intermediate biosynthetic process | 0.014521817 | GO:0006490 |
| mannosylation | 0.014521817 | GO:0097502 |
| plant-type cell wall biogenesis | 0.014521817 | GO:0009832 |
| regulation of protein kinase activity | 0.014521817 | GO:0045859 |
| Cell cycle | 0.014521817 | KEGG pathway |
| protein N-linked glycosylation | 0.015229939 | GO:0006487 |
| response to osmotic stress | 0.015229939 | GO:0006970 |
| magnesium ion transmembrane transport | 0.015229939 | GO:1903830 |
| magnesium ion transport | 0.015229939 | GO:0015693 |
| magnesium ion transmembrane transporter activity | 0.01540566 | GO:0015095 |
| tricarboxylic acid cycle | 0.024969176 | GO:0006099 |
| N-Glycan biosynthesis | 0.025262984 | KEGG pathway |
| cell division | 0.031458156 | GO:0051301 |
| endoplasmic reticulum membrane | 0.038032504 | GO:0005789 |
| response to abscisic acid | 0.044185755 | GO:0009737 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002227 | AT3G59310 (4.00E-31) | Eukaryotic protein of unknown function (DUF914) |
| CRO_T003373 | AT2G27960 (3.00E-14) | CKS1|cyclin-dependent kinase-subunit 1 |
| CRO_T008911 | AT2G40190 (0) | LEW3|LEAF WILTING 3 |
| CRO_T010587 | AT1G30900 (0) | BP80-3; 3|binding protein of 80 kDa 3; 3; VSR3; 3|VACUOLAR SORTING RECEPTOR 3; 3; VSR6|VACUOLAR SORTING RECEPTOR 6 |
| CRO_T014529 | AT1G54220 (2.00E-24) | Dihydrolipoamide acetyltransferase, long form protein |
| CRO_T015651 | AT3G26670 (4.00E-155) | Protein of unknown function (DUF803) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000271 | Transcription_related, Transcription regulator: SOH1 L-alanine degradation II (to D-lactate) L-glutamate degradation I Cell cycle - yeast plant-type vacuole membrane glutamate dehydrogenase [NAD(P)+] activity cellular potassium ion homeostasis regulation of protein kinase activity Cell cycle | details |
| TreatCFM000445 | gibberellin biosynthesis III (early C-13 hydroxylation) regulation of protein kinase activity Cell cycle Cell cycle - yeast Diterpenoid biosynthesis cyclin-dependent protein serine/threonine kinase regulator activity cell division | details |
| TreatCFM002026 | carpel development regulation of meristem structural organization magnesium ion transport magnesium ion transmembrane transport Transcription_related, Transcription factor: HB magnesium ion transmembrane transporter activity lyase activity | details |
Expression profiles
 Show details about module gene expression profiling |