TreatCFM001365's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:1.14.2: Receptor Like Cytoplasmic Kinase IX | 2.10E-05 | kinase family |
| response to stress | 0.003320495 | GO:0006950 |
| ATP binding | 0.005224045 | GO:0005524 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.014256608 | cazy family |
| Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | 0.014256608 | kinase family |
| 3-phosphoinositide biosynthesis | 0.01554784 | plantCyc |
| D-myo-inositol (1,4,5)-trisphosphate biosynthesis | 0.01554784 | plantCyc |
| xylan biosynthesis | 0.01554784 | plantCyc |
| DNA replication | 0.017291385 | KEGG pathway |
| Inositol phosphate metabolism | 0.017291385 | KEGG pathway |
| 1-phosphatidylinositol-4-phosphate 5-kinase activity | 0.018049507 | GO:0016308 |
| DNA ligase (ATP) activity | 0.020046712 | GO:0003910 |
| DNA ligation involved in DNA repair | 0.039069009 | GO:0051103 |
| DNA recombination | 0.040625395 | GO:0006310 |
| pollen germination | 0.040625395 | GO:0009846 |
| phosphatidylinositol phosphorylation | 0.040625395 | GO:0046854 |
| DNA biosynthetic process | 0.040625395 | GO:0071897 |
| cellulose synthase (UDP-forming) activity | 0.042019801 | GO:0016760 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005578 | AT1G02730 (0) | ATCSLD5|cellulose synthase-like D5; CSLD5|CELLULOSE SYNTHASE LIKE D5; SOS6|SALT OVERLY SENSITIVE 6 |
| CRO_T010592 | - | - |
| CRO_T012670 | AT2G19400 (0) | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
| CRO_T017763 | AT2G03720 (2.00E-14) | MRH6|morphogenesis of root hair 6 |
| CRO_T019232 | AT2G41210 (0) | PIP5K5|phosphatidylinositol- 4-phosphate 5-kinase 5 |
| CRO_T021792 | AT2G24370 (0) | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
| CRO_T022425 | AT1G66730 (0) | AtLIG6|DNA LIGASE 6 |
| CRO_T025370 | AT2G24370 (0) | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000232 | Lipoic acid metabolism lipoate biosynthesis and incorporation I xyloglucan biosynthesis protein lipoylation lipoate biosynthetic process cytoplasmic microtubule organization Protein_kinases_phosphatases, PPC:1.14.2: Receptor Like Cytoplasmic Kinase IX octanoyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: C3H response to stress microtubule-severing ATPase activity | details |
| TreatCFM000511 | Protein_kinases_phosphatases, PPC:1.14.2: Receptor Like Cytoplasmic Kinase IX photosynthetic acclimation Plant-pathogen interaction regulation of membrane potential voltage-gated potassium channel activity potassium ion transmembrane transport response to stress peptidase activity | details |
| TreatCFM001584 | DNA replication Transcription_related, Transcription factor: C3H DNA ligation involved in DNA repair regulation of seed germination DNA biosynthetic process DNA recombination vegetative to reproductive phase transition of meristem DNA ligase (ATP) activity response to salt stress abscisic acid-activated signaling pathway response to water deprivation response to stress | details |
Expression profiles
 Show details about module gene expression profiling |