TreatCFM001376's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| priming of cellular response to stress | 0.003926845 | GO:0080136 |
| activation of MAPK activity involved in osmosensory signaling pathway | 0.003926845 | GO:0000169 |
| camalexin biosynthetic process | 0.003926845 | GO:0010120 |
| inflorescence development | 0.005888961 | GO:0010229 |
| pollen tube guidance | 0.005888961 | GO:0010183 |
| jasmonic acid biosynthesis | 0.007072836 | plantCyc |
| protein metabolic process | 0.007569284 | GO:0019538 |
| plant ovule development | 0.007569284 | GO:0048481 |
| metalloexopeptidase activity | 0.007819149 | GO:0008235 |
| Protein_kinases_phosphatases, PPC:4.5.1: MAPK Family | 0.008492422 | kinase family |
| redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 | 0.008492422 | cazy family |
| response to UV-B | 0.010298831 | GO:0010224 |
| response to osmotic stress | 0.010460759 | GO:0006970 |
| aminopeptidase activity | 0.013020365 | GO:0004177 |
| MAP kinase activity | 0.013020365 | GO:0004707 |
| MAPK signaling pathway - plant | 0.01934999 | KEGG pathway |
| MAPK cascade | 0.021151758 | GO:0000165 |
| pollen development | 0.021891459 | GO:0009555 |
| isomerase activity | 0.023400321 | GO:0016853 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000174 | AT1G26380 (2.00E-105) | FAD-binding Berberine family protein |
| CRO_T000739 | - | - |
| CRO_T008861 | - | - |
| CRO_T024030 | AT3G07760 (9.00E-57) | Sterile alpha motif (SAM) domain-containing protein |
| CRO_T025299 | AT3G45640 (0) | ATMPK3|mitogen-activated protein kinase 3 |
| CRO_T031166 | AT3G25740 (1.00E-107) | MAP1B|methionine aminopeptidase 1C |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000795 | peptidase activity photosynthetic acclimation trans-lycopene biosynthesis II (plants) acetylglucosaminyltransferase activity Carotenoid biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM000998 | L-leucine biosynthesis DNA-3-methyladenine glycosylase activity hydro-lyase activity protein histidine kinase binding protein metabolic process base-excision repair 2-Oxocarboxylic acid metabolism Base excision repair | details |
| TreatCFM001328 | Nucleotide excision repair 1,3-beta-D-glucan synthase activity protein histidine kinase binding DNA-3-methyladenine glycosylase activity Base excision repair (1->3)-beta-D-glucan biosynthetic process protein metabolic process base-excision repair 1,3-beta-D-glucan synthase complex | details |
| TreatCFM001678 | Nucleotide excision repair Base excision repair beta-tubulin binding DNA-3-methyladenine glycosylase activity protein histidine kinase binding Group II intron splicing protein metabolic process tubulin complex assembly post-chaperonin tubulin folding pathway microtubule cytoskeleton organization base-excision repair cytochrome complex assembly GTPase activator activity positive regulation of GTPase activity | details |
| TreatCFM001755 | Phenylpropanoid biosynthesis L-citrulline degradation protein metabolic process arginine biosynthetic process via ornithine urea cycle ornithine carbamoyltransferase activity metalloexopeptidase activity L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle chlorogenic acid biosynthesis II ajmaline and sarpagine biosynthesis chlorogenic acid biosynthesis I jasmonic acid biosynthesis AMPK signaling pathway aminopeptidase activity chloroplast small GTPase mediated signal transduction oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | details |
| TreatCFM001944 | fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) fatty acid beta-oxidation using acyl-CoA dehydrogenase lipid homeostasis acyl-CoA dehydrogenase activity acyl-CoA oxidase activity oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor fatty-acyl-CoA binding jasmonic acid biosynthesis cell wall organization or biogenesis O-acetyltransferase activity Fatty acid metabolism Peroxisome Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
Expression profiles
 Show details about module gene expression profiling |