TreatCFM001451's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| pyruvate decarboxylation to acetyl CoA | 0.002657217 | plantCyc |
| response to metal ion | 0.002955301 | GO:0010038 |
| pollen tube development | 0.005907982 | GO:0048868 |
| Transcription_related, Transcription factor: HB | 0.013227325 | TF family |
| glycolytic process | 0.018177289 | GO:0006096 |
| transketolase activity | 0.019798948 | GO:0004802 |
| ribosomal large subunit binding | 0.019798948 | GO:0043023 |
| pyruvate dehydrogenase (acetyl-transferring) activity | 0.019798948 | GO:0004739 |
| oxidation-reduction process | 0.039363527 | GO:0055114 |
| ribosome binding | 0.041199073 | GO:0043022 |
| Carbon metabolism | 0.047108101 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000050 | AT4G37790 (2.00E-49) | HAT22|Homeobox-leucine zipper protein family |
| CRO_T003447 | AT1G30120 (0) | PDH-E1 BETA|pyruvate dehydrogenase E1 beta |
| CRO_T010851 | AT2G20800 (0) | NDB4|NAD(P)H dehydrogenase B4 |
| CRO_T014915 | - | - |
| CRO_T018572 | AT1G30580 (0) | GTP binding |
| CRO_T024812 | AT2G33740 (5.00E-37) | CUTA|Nitrogen regulatory PII-like, alpha/beta |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000095 | defense response, incompatible interaction activation of MAPK activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAP kinase kinase activity lipid transporter activity Base excision repair Lysosome MAPK cascade MAP kinase activity | details |
| TreatCFM000184 | trans-lycopene biosynthesis II (plants) biotin biosynthetic process endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ribosomal large subunit export from nucleus ribosomal large subunit biogenesis dethiobiotin synthase activity adenosylmethionine-8-amino-7-oxononanoate transaminase activity Biotin metabolism ribosomal large subunit binding | details |
| TreatCFM000780 | response to metal ion ribosomal large subunit binding | details |
| TreatCFM000781 | thiosulfate disproportionation IV (rhodanese) response to metal ion Sulfur metabolism negative regulation of endopeptidase activity ribosomal large subunit binding cysteine-type endopeptidase inhibitor activity | details |
| TreatCFM000805 | pyruvate decarboxylation to acetyl CoA ATP-binding cassette (ABC) transporter complex pyruvate dehydrogenase (acetyl-transferring) activity transketolase activity phospholipid binding phospholipid transporter activity Cell cycle - yeast vesicle docking involved in exocytosis phospholipid transport pollen tube development chloroplast outer membrane chloroplast inner membrane glycolytic process serine-type endopeptidase activity | details |
| TreatCFM001128 | Transcription_related, Transcription factor: C3H Ubiquitin mediated proteolysis | details |
| TreatCFM001361 | epoxysqualene biosynthesis pyruvate decarboxylation to acetyl CoA transketolase activity squalene synthase activity farnesyl-diphosphate farnesyltransferase activity pyruvate dehydrogenase (acetyl-transferring) activity lipid biosynthetic process pollen tube development Transcription_related, Transcription factor: M-type glycolytic process Cell cycle - yeast Steroid biosynthesis | details |
| TreatCFM001450 | fatty acid biosynthesis initiation I L-amino acid transport response to metal ion L-alpha-amino acid transmembrane transport 3-oxoacyl-[acyl-carrier-protein] synthase activity beta-ketoacyl-acyl-carrier-protein synthase III activity Fatty acid metabolism L-amino acid transmembrane transporter activity Transcription_related, Transcription factor: HB fatty acid biosynthetic process | details |
| TreatCFM001468 | Protein_kinases_phosphatases, PPC:4.5.1.1: Male grem cell-associated kinase (mak) L-glutamine degradation I L-histidine biosynthesis ligase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity oxo-acid-lyase activity galactosylxylosylprotein 3-beta-galactosyltransferase activity imidazoleglycerol-phosphate synthase activity protein O-linked glycosylation via hydroxyproline arabinogalactan protein metabolic process Transcription_related, Transcription factor: MIKC formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001584 | DNA replication Transcription_related, Transcription factor: C3H DNA ligation involved in DNA repair regulation of seed germination DNA biosynthetic process DNA recombination vegetative to reproductive phase transition of meristem DNA ligase (ATP) activity response to salt stress abscisic acid-activated signaling pathway response to water deprivation response to stress | details |
| TreatCFM002075 | phosphocholine phosphatase activity phosphoethanolamine phosphatase activity undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Vitamin B6 metabolism response to metal ion Glycosylphosphatidylinositol(GPI)-anchor biosynthesis GPI-anchor transamidase complex Ubiquitin_Proteasome_system, DUB: USP lipid glycosylation attachment of GPI anchor to protein cysteine-type peptidase activity cellular protein metabolic process | details |
Expression profiles
 Show details about module gene expression profiling |