TreatCFM001534's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| GDP-mannose transmembrane transport | 0.000531915 | GO:1990570 |
| Herpes simplex infection | 0.001063594 | KEGG pathway |
| GDP-mannose transmembrane transporter activity | 0.001595745 | GO:0005458 |
| mitochondrial matrix | 0.020689575 | GO:0005759 |
| Golgi apparatus | 0.044658497 | GO:0005794 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000721 | AT1G53190 (3.00E-13) | RING/U-box superfamily protein |
| CRO_T005766 | - | - |
| CRO_T010054 | AT4G16580 (9.00E-154) | Protein phosphatase 2C family protein |
| CRO_T021035 | AT2G39790 (8.00E-30) | Mitochondrial glycoprotein family protein |
| CRO_T026656 | AT5G37730 (8.00E-24) | unknown protein |
| CRO_T031907 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000589 | Ubiquitin_Proteasome_system, E3: RING Transcription_related, Transcription regulator: Jumonji zinc ion binding | details |
| TreatCFM000664 | TFIIK complex Herpes simplex infection Selenocompound metabolism response to abiotic stimulus positive regulation of phosphorylation of RNA polymerase II C-terminal domain aspartyl-tRNA aminoacylation selenium compound metabolic process positive regulation of cyclin-dependent protein serine/threonine kinase activity positive regulation of ubiquitin-protein transferase activity protein neddylation S-adenosylmethionine metabolic process GDP-mannose transmembrane transport GDP-mannose transmembrane transporter activity cullin family protein binding aspartate-tRNA ligase activity ubiquitin-like protein binding vacuolar transport cyclin-dependent protein serine/threonine kinase regulator activity positive regulation of transcription from RNA polymerase II promoter cyclin-dependent protein kinase holoenzyme complex ubiquitin conjugating enzyme binding transaminase activity ubiquitin ligase complex | details |
| TreatCFM000806 | Transcription_related, Transcription factor: EIL positive regulation of translational fidelity cytosolic small ribosomal subunit | details |
Expression profiles
 Show details about module gene expression profiling |