TreatCFM000589's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3: RING | 0.004010478 | ubs family |
| Transcription_related, Transcription regulator: Jumonji | 0.004781931 | TF family |
| zinc ion binding | 0.00534613 | GO:0008270 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000721 | AT1G53190 (3.00E-13) | RING/U-box superfamily protein |
| CRO_T000812 | AT1G48840 (0) | Plant protein of unknown function (DUF639) |
| CRO_T018063 | AT5G13660 (2.00E-04) | unknown protein |
| CRO_T027829 | AT1G09060 (0) | Zinc finger, RING-type; Transcription factor jumonji/aspartyl beta-hydroxylase |
| CRO_T029063 | - | - |
| CRO_T033038 | AT3G49470 (5.00E-43) | NACA2|nascent polypeptide-associated complex subunit alpha-like protein 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001167 | Autophagy - yeast Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family tau-protein kinase activity | details |
| TreatCFM001191 | glycerophosphodiester phosphodiesterase activity Circadian rhythm - plant Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase Transcription_related, Transcription regulator: Pseudo ARR-B Transcription_related, Transcription regulator: Jumonji phosphorelay signal transduction system lipid metabolic process | details |
| TreatCFM001363 | Ubiquitin_Proteasome_system, E3 adaptor: DWD S-adenosyl-L-methionine cycle II 2'-deoxymugineic acid phytosiderophore biosynthesis L-methionine degradation I (to L-homocysteine) L-methionine salvage cycle I (bacteria and plants) L-methionine salvage cycle II (plants) S-adenosyl-L-methionine biosynthesis ethylene biosynthesis I (plants) anaphase-promoting complex binding methionine adenosyltransferase activity ubiquitin-protein transferase activator activity potassium ion transmembrane transporter activity NOD-like receptor signaling pathway oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | details |
| TreatCFM001373 | negative regulation of apoptotic process Apelin signaling pathway Autophagy - yeast Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) RNA processing | details |
| TreatCFM001501 | Wnt signaling pathway ruffle membrane Transcription_related, Transcription regulator: PHD negative regulation of nucleic acid-templated transcription regulation of ruffle assembly protein methylation protein methyltransferase activity transcription corepressor activity histone acetylation histone acetyltransferase activity transcription cofactor activity phosphatidylinositol binding | details |
| TreatCFM001534 | GDP-mannose transmembrane transport Herpes simplex infection GDP-mannose transmembrane transporter activity mitochondrial matrix Golgi apparatus | details |
| TreatCFM001727 | UMP biosynthesis I Wnt signaling pathway negative regulation of apoptotic process pyrimidine ribonucleotide biosynthetic process urea cycle aspartate carbamoyltransferase activity Apelin signaling pathway Pyrimidine metabolism 'de novo' pyrimidine nucleobase biosynthetic process histone acetylation cellular amino acid metabolic process Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) Transcription_related, Transcription regulator: Jumonji Transcription_related, Transcription regulator: PHD transcription cofactor activity histone acetyltransferase activity | details |
| TreatCFM002033 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription regulator: IWS1 elongin complex benzoate biosynthesis I (CoA-dependent, β-oxidative) transcription elongation from RNA polymerase II promoter chitin catabolic process glutathione metabolic process chitinase activity chitin binding Amino sugar and nucleotide sugar metabolism Glutathione metabolism mRNA surveillance pathway glutathione transferase activity | details |
Expression profiles
 Show details about module gene expression profiling |