TreatCFM001658's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| alpha-Linolenic acid metabolism | 1.34E-05 | KEGG pathway |
| dioxygenase activity | 0.000853739 | GO:0051213 |
| peroxidase activity | 0.000853739 | GO:0004601 |
| response to oxidative stress | 0.001262771 | GO:0006979 |
| cellular oxidant detoxification | 0.001262771 | GO:0098869 |
| nucleolar ribonuclease P complex | 0.001417916 | GO:0005655 |
| fatty acid α-oxidation I | 0.002126245 | plantCyc |
| heme binding | 0.005514414 | GO:0020037 |
| ribonuclease P activity | 0.007163317 | GO:0004526 |
| Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase | 0.011815964 | kinase family |
| gene silencing by RNA | 0.012843743 | GO:0031047 |
| Transcription_related, Transcription regulator: AUX/IAA | 0.014756865 | TF family |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.015236373 | cazy family |
| RNA phosphodiester bond hydrolysis, endonucleolytic | 0.029815405 | GO:0090502 |
| Plant hormone signal transduction | 0.042841753 | KEGG pathway |
| regulation of cellular process | 0.046066988 | GO:0050794 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T018892 | AT1G34320 (1.00E-33) | Protein of unknown function (DUF668) |
| CRO_T021428 | AT3G12550 (8.00E-138) | FDM3|factor of DNA methylation 3 |
| CRO_T028622 | AT3G55950 (3.00E-64) | CCR3|CRINKLY4 related 3 |
| CRO_T030670 | AT5G65670 (5.00E-26) | IAA9|indole-3-acetic acid inducible 9 |
| CRO_T031302 | AT3G01420 (2.00E-99) | ALPHA-DOX1|alpha-dioxygenase 1; PADOX-1|plant alpha dioxygenase 1 |
| CRO_T031303 | AT3G01420 (5.00E-151) | ALPHA-DOX1|alpha-dioxygenase 1; PADOX-1|plant alpha dioxygenase 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001659 | condensed chromosome chromosome condensation Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX Transcription_related, Transcription regulator: AUX/IAA Cell cycle - yeast adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 DNA replication DNA recombination protein phosphorylation mitotic nuclear division DNA repair drug transmembrane transport regulation of cellular process | details |
Expression profiles
 Show details about module gene expression profiling |