TreatCFM001722's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| fumarylacetoacetase activity | 0.001950499 | GO:0004334 |
| aromatic amino acid family metabolic process | 0.002127502 | GO:0009072 |
| HAUS complex | 0.002392556 | GO:0070652 |
| spindle microtubule | 0.002392556 | GO:0005876 |
| spindle assembly | 0.002658199 | GO:0051225 |
| microtubule minus-end binding | 0.003412112 | GO:0051011 |
| Tyrosine metabolism | 0.005847606 | KEGG pathway |
| Ubiquitin_Proteasome_system, E2: UBC | 0.007249122 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000953 | AT5G15980 (2.00E-152) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T003837 | AT3G55160 (0) | unknown protein |
| CRO_T011040 | AT1G12050 (0) | FAH|fumarylacetoacetate hydrolase; SSCD1|short-day sensitive cell deathshort-day sensitive cell deathshort-day sensitive cell death 111 |
| CRO_T025046 | AT2G46030 (9.00E-24) | UBC6|ubiquitin-conjugating enzyme 6 |
| CRO_T026830 | AT1G50710 (8.00E-119) | 4-Aug|augmin subunit 4 |
| CRO_T032633 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM002015 | Glucagon signaling pathway mucilage biosynthetic process involved in seed coat development positive regulation of kinase activity maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular response to stress regulation of translation plasmodesma PeBoW complex maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) regulation of protein kinase activity vesicle docking involved in exocytosis ribonucleoprotein complex binding protein kinase regulator activity Ubiquitin_Proteasome_system, E2: UBC nucleoplasm preribosome, large subunit precursor exocyst protein kinase binding ribosome binding signal transducer activity nucleotidyltransferase activity phosphoprotein phosphatase activity protein transport DNA replication | details |
| TreatCFM002159 | vacuolar membrane cell tip growth regulation of signal transduction potassium ion transmembrane transporter activity potassium ion transmembrane transport protein processing response to salt stress | details |
Expression profiles
 Show details about module gene expression profiling |