TreatCFM001820's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| aerobic respiration I (cytochrome c) | 0.000198912 | plantCyc |
| Transcription_related, Transcription factor: NF-YC | 0.002892987 | TF family |
| Oxidative phosphorylation | 0.003290071 | KEGG pathway |
| fructose 6-phosphate metabolic process | 0.008652562 | GO:0006002 |
| UDP-N-acetylglucosamine metabolic process | 0.008652562 | GO:0006047 |
| oxidation-reduction process | 0.008652562 | GO:0055114 |
| Antigen processing and presentation | 0.008976978 | KEGG pathway |
| aerobic respiration III (alternative oxidase pathway) | 0.015118855 | plantCyc |
| NAD/NADH phosphorylation and dephosphorylation | 0.015118855 | plantCyc |
| glutamine-fructose-6-phosphate transaminase (isomerizing) activity | 0.020613192 | GO:0004360 |
| ubiquinol-cytochrome-c reductase activity | 0.027472074 | GO:0008121 |
| hydrogen ion transmembrane transport | 0.041664101 | GO:1902600 |
| FMN binding | 0.04932714 | GO:0010181 |
| 2 iron, 2 sulfur cluster binding | 0.04932714 | GO:0051537 |
| isomerase activity | 0.04932714 | GO:0016853 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000985 | AT5G62230 (2.00E-47) | ERL1|ERECTA-like 1 |
| CRO_T003019 | AT5G52190 (8.00E-70) | Sugar isomerase (SIS) family protein |
| CRO_T007272 | AT1G08970 (7.00E-65) | HAP5C|HEME ACTIVATED PROTEIN 5C; NF-YC9|nuclear factor Y, subunit C9 |
| CRO_T015428 | AT5G13430 (1.00E-76) | Ubiquinol-cytochrome C reductase iron-sulfur subunit |
| CRO_T020546 | AT3G59070 (5.00E-55) | Cytochrome b561/ferric reductase transmembrane with DOMON related domain |
| CRO_T023739 | AT1G04490 (5.00E-45) | Protein of unknown function (DUF3527) |
| CRO_T028505 | AT5G08530 (0) | CI51|51 kDa subunit of complex I |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000979 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc integral component of membrane 4-alpha-glucanotransferase activity heteropolysaccharide binding dipeptidyl-peptidase activity Renin-angiotensin system starch binding glycogen metabolic process maltose catabolic process sucrose biosynthesis II protein phosphorylation triacylglycerol degradation plasma membrane Lysosome Glycerolipid metabolism serine-type carboxypeptidase activity regulation of cellular process Starch and sucrose metabolism Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | details |
| TreatCFM001577 | quercetin sulfate biosynthesis aerobic respiration I (cytochrome c) Fanconi anemia pathway Ubiquitin_Proteasome_system, E3: RING ubiquinol-cytochrome-c reductase activity P-P-bond-hydrolysis-driven protein transmembrane transporter activity sulfotransferase activity myosin heavy chain kinase activity | details |
| TreatCFM001616 | L-cysteine biosynthesis I Transcription_related, Transcription factor: NF-YC glutamine-fructose-6-phosphate transaminase (isomerizing) activity chromoplast Arp2/3 protein complex UDP-N-acetylglucosamine metabolic process fructose 6-phosphate metabolic process cysteine biosynthetic process from serine Arp2/3 complex-mediated actin nucleation cysteine synthase activity cellular amino acid biosynthetic process Antigen processing and presentation isomerase activity Endocytosis | details |
| TreatCFM001996 | UDP-L-arabinose biosynthesis I (from UDP-xylose) UDP-sugars interconversion Phagosome aerobic respiration I (cytochrome c) galactose metabolic process microtubule-based process ubiquinol-cytochrome-c reductase activity UDP-glucose 4-epimerase activity structural constituent of cytoskeleton 2 iron, 2 sulfur cluster binding hydrogen ion transmembrane transport Amino sugar and nucleotide sugar metabolism | details |
Expression profiles
 Show details about module gene expression profiling |