TreatCFM001835's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| L-threonine biosynthesis | 0.000531915 | plantCyc |
| threonine synthase activity | 0.002955301 | GO:0004795 |
| cellular response to nitrogen starvation | 0.006070003 | GO:0006995 |
| ribosomal small subunit biogenesis | 0.006070003 | GO:0042274 |
| threonine biosynthetic process | 0.006070003 | GO:0009088 |
| autophagy | 0.008089153 | GO:0006914 |
| Apelin signaling pathway | 0.012215977 | KEGG pathway |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.013051924 | cazy family |
| Biosynthesis of amino acids | 0.024832496 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005343 | AT1G22460 (1.00E-47) | O-fucosyltransferase family protein |
| CRO_T006607 | AT2G05630 (2.00E-53) | ATG8D|Ubiquitin-like superfamily protein |
| CRO_T012202 | AT1G08845 (3.00E-75) | Ribosomal L18p/L5e family protein |
| CRO_T019538 | AT5G17930 (2.00E-129) | MIF4G domain-containing protein / MA3 domain-containing protein |
| CRO_T021623 | AT2G40760 (3.00E-152) | Rhodanese/Cell cycle control phosphatase superfamily protein |
| CRO_T021795 | AT1G72810 (0) | Pyridoxal-5'-phosphate-dependent enzyme family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000850 | Cytochrome_P450, Cytochrome P450: CYP83B hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Cytochrome_P450, Cytochrome P450: CYP81D ternatin C3 biosynthesis Galactose metabolism secondary metabolic process defense response to other organism phosphate-containing compound metabolic process indole glucosinolate metabolic process secologanin and strictosidine biosynthesis sesamin biosynthesis vindoline and vinblastine biosynthesis | details |
| TreatCFM001133 | L-lysine biosynthesis VI pyruvate decarboxylation to acetyl CoA Transcription_related, Transcription factor: NF-YB cellular response to nitrogen starvation metabolic process glycogen catabolic process diaminopimelate biosynthetic process lysine biosynthetic process via diaminopimelate 4-hydroxy-tetrahydrodipicolinate synthase autophagy glycogen phosphorylase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Antigen processing and presentation Apelin signaling pathway amyloplast cytosolic ribosome chloroplast | details |
| TreatCFM001560 | pyruvate decarboxylation to acetyl CoA Carbon metabolism 2-oxoglutarate decarboxylation to succinyl-CoA glycine cleavage 2-oxoisovalerate decarboxylation to isobutanoyl-CoA formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc methylenetetrahydrofolate reductase (NAD(P)H) activity ATPase binding oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor dihydrolipoyl dehydrogenase activity glycopeptide alpha-N-acetylgalactosaminidase activity sucrose alpha-glucosidase activity response to arsenic-containing substance acetyl-CoA biosynthetic process from pyruvate tetrahydrofolate interconversion metabolic process methionine metabolic process vacuolar acidification vacuolar proton-transporting V-type ATPase complex assembly proton-transporting ATPase activity, rotational mechanism vacuolar proton-transporting V-type ATPase, V0 domain cytosolic ribosome chloroplast envelope plant-type vacuole ATP hydrolysis coupled proton transport ATP synthesis coupled proton transport transferase activity, transferring acyl groups | details |
Expression profiles
 Show details about module gene expression profiling |