TreatCFM001847's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Adherens junction | 0.001241171 | KEGG pathway |
| regulation of shoot system development | 0.007867607 | GO:0048831 |
| positive regulation of histone methylation | 0.007867607 | GO:0031062 |
| system development | 0.007867607 | GO:0048731 |
| regulation of RNA metabolic process | 0.007867607 | GO:0051252 |
| regulation of gene expression | 0.01706578 | GO:0010468 |
| single-organism cellular process | 0.028548997 | GO:0044763 |
| response to stimulus | 0.028548997 | GO:0050896 |
| translational initiation | 0.028548997 | GO:0006413 |
| RNA transport | 0.046843872 | KEGG pathway |
| translation initiation factor activity | 0.048080705 | GO:0003743 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000995 | AT2G01300 (1.00E-34) | unknown protein |
| CRO_T002605 | AT2G24050 (0) | eIFiso4G2|eukaryotic translation Initiation Factor isoform 4G2 |
| CRO_T004428 | AT4G28770 (1.00E-11) | Tetraspanin family protein |
| CRO_T021068 | AT5G55390 (2.00E-108) | EDM2|ENHANCED DOWNY MILDEW 2 |
| CRO_T021261 | AT5G57410 (2.00E-141) | Afadin/alpha-actinin-binding protein |
| CRO_T030099 | AT5G55640 (2.00E-38) | unknown protein |
| CRO_T033382 | AT3G56590 (4.00E-73) | hydroxyproline-rich glycoprotein family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001094 | Legionellosis osmosensor activity homogalacturonan degradation histidine phosphotransfer kinase activity stomatal complex patterning positive regulation of histone methylation regulation of RNA metabolic process regulation of shoot system development system development seed maturation response to osmotic stress regulation of gene expression aspartyl esterase activity pectinesterase activity metal ion binding phosphorelay sensor kinase activity pectinesterase inhibitor activity hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 Transcription_related, Transcription factor: Orphans protein processing signal transduction by protein phosphorylation response to water deprivation cell wall modification response to stimulus negative regulation of catalytic activity phosphorelay signal transduction system single-organism cellular process pectin catabolic process | details |
| TreatCFM001377 | homogalacturonan biosynthesis response to zinc ion positive regulation of histone methylation regulation of shoot system development system development regulation of RNA metabolic process regulation of sequestering of zinc ion polygalacturonate 4-alpha-galacturonosyltransferase activity zinc ion transmembrane transporter activity pectin biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E3 adaptor: BTB regulation of gene expression zinc II ion transmembrane transport response to stimulus single-organism cellular process | details |
| TreatCFM001861 | post-embryonic root development ether hydrolase activity Adherens junction xyloglucan biosynthesis PPAR signaling pathway MAPK signaling pathway - yeast protein domain specific binding formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E2: UBC | details |
| TreatCFM002057 | Phenylpropanoid biosynthesis cellular oxidant detoxification response to oxidative stress hydrogen peroxide catabolic process | details |
Expression profiles
 Show details about module gene expression profiling |