TreatCFM001914's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| anthranilate synthase complex | 0.002955301 | GO:0005950 |
| L-tryptophan biosynthesis | 0.004602101 | plantCyc |
| metal ion transmembrane transporter activity | 0.009636367 | GO:0046873 |
| anthranilate synthase activity | 0.009636367 | GO:0004049 |
| ribonucleoside binding | 0.019258498 | GO:0032549 |
| tryptophan biosynthetic process | 0.027586936 | GO:0000162 |
| metal ion transport | 0.027586936 | GO:0030001 |
| chloroplast organization | 0.027586936 | GO:0009658 |
| DNA-directed RNA polymerase activity | 0.044193212 | GO:0003899 |
| Biosynthesis of amino acids | 0.049664992 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003119 | AT1G29820 (2.00E-86) | Magnesium transporter CorA-like family protein |
| CRO_T012104 | AT1G24909 (8.00E-105) | Glutamine amidotransferase type 1 family protein |
| CRO_T016307 | AT4G27680 (0) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T020324 | AT2G01650 (1.00E-125) | PUX2|plant UBX domain-containing protein 2 |
| CRO_T020814 | AT4G21710 (3.00E-52) | EMB1989|EMBRYO DEFECTIVE 1989 |
| CRO_T023163 | AT3G18420 (1.00E-78) | Protein prenylyltransferase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001007 | Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII L-citrulline degradation arginine biosynthetic process via ornithine urea cycle L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle ornithine carbamoyltransferase activity Biosynthesis of amino acids transmembrane receptor protein tyrosine kinase activity peptidyl-tyrosine phosphorylation amino acid binding coenzyme binding | details |
| TreatCFM001322 | protein localization to organelle protein transmembrane transport ribonucleoside binding protein channel activity GTPase activator activity DNA-directed RNA polymerase activity | details |
| TreatCFM001593 | heterotrimeric G-protein complex G-protein coupled receptor signaling pathway isoflavonoid biosynthesis II benzoate biosynthesis I (CoA-dependent, β-oxidative) ribonucleoside binding signal transducer activity DNA-directed RNA polymerase activity | details |
Expression profiles
 Show details about module gene expression profiling |