TreatCFM001593's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| heterotrimeric G-protein complex | 0.000886394 | GO:0005834 |
| G-protein coupled receptor signaling pathway | 0.005847606 | GO:0007186 |
| isoflavonoid biosynthesis II | 0.014866131 | plantCyc |
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 0.016681209 | plantCyc |
| ribonucleoside binding | 0.024253118 | GO:0032549 |
| signal transducer activity | 0.024253118 | GO:0004871 |
| DNA-directed RNA polymerase activity | 0.030939765 | GO:0003899 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T011259 | AT3G50900 (6.00E-07) | unknown protein |
| CRO_T014354 | AT5G16080 (1.00E-34) | AtCXE17|carboxyesterase 17 |
| CRO_T020814 | AT4G21710 (3.00E-52) | EMB1989|EMBRYO DEFECTIVE 1989 |
| CRO_T020988 | AT3G63420 (3.00E-12) | AGG1|Ggamma-subunit 1 |
| CRO_T026223 | AT1G29170 (9.00E-16) | ATSCAR3|WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 2 |
| CRO_T030553 | AT5G59410 (4.00E-46) | Rab5-interacting family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001131 | chorismate biosynthesis from 3-dehydroquinate UDP-D-xylose biosynthesis chorismate synthase activity UDP-glucuronate decarboxylase activity 5'-3' exonuclease activity aromatic amino acid family biosynthetic process chorismate biosynthetic process DNA-dependent DNA replication DNA-directed DNA polymerase activity FMN binding cellular amino acid biosynthetic process exocytosis nucleic acid phosphodiester bond hydrolysis Insulin signaling pathway | details |
| TreatCFM001322 | protein localization to organelle protein transmembrane transport ribonucleoside binding protein channel activity GTPase activator activity DNA-directed RNA polymerase activity | details |
| TreatCFM001519 | vacuolar proton-transporting V-type ATPase complex heterotrimeric G-protein complex hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances adenosine ribonucleotides de novo biosynthesis signal transducer activity G-protein coupled receptor signaling pathway proton transport Oxidative phosphorylation | details |
| TreatCFM001551 | cytosol regulation of calcium or calmodulin-mediated signal transduction in response to host detection of calcium ion sucrose biosynthetic process modulation by symbiont of host calcium or calmodulin-mediated signal transduction nectar secretion mitochondrial respiratory chain complex assembly protein processing involved in protein targeting to mitochondrion regulation of photomorphogenesis calcium-mediated signaling sucrose biosynthesis I (from photosynthesis) sucrose biosynthesis II mitochondrial inner membrane peptidase complex signal peptide processing Ras signaling pathway formation of translation preinitiation complex regulation of translational initiation eukaryotic 48S preinitiation complex eukaryotic 43S preinitiation complex eukaryotic translation initiation factor 3 complex sucrose-phosphate synthase activity sucrose synthase activity ribosome binding Starch and sucrose metabolism translation initiation factor activity protein binding 2-alkenal reductase [NAD(P)] activity | details |
| TreatCFM001914 | anthranilate synthase complex L-tryptophan biosynthesis metal ion transmembrane transporter activity anthranilate synthase activity ribonucleoside binding tryptophan biosynthetic process metal ion transport chloroplast organization DNA-directed RNA polymerase activity Biosynthesis of amino acids | details |
| TreatCFM001987 | protein transmembrane transport protein localization to organelle cysteine biosynthetic process from serine cellular amino acid biosynthetic process protein channel activity cysteine synthase activity positive regulation of GTPase activity pollen development MAPK signaling pathway GTPase activator activity embryo development ending in seed dormancy Endocytosis RNA degradation | details |
Expression profiles
 Show details about module gene expression profiling |