TreatCFM001965's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Starch and sucrose metabolism | 0.000683016 | KEGG pathway |
| trehalose-phosphatase activity | 0.025735171 | GO:0004805 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.026230762 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.026230762 | cazy family |
| cytoskeleton organization | 0.031574503 | GO:0007010 |
| trehalose biosynthetic process | 0.031574503 | GO:0005992 |
| Phenylpropanoid biosynthesis | 0.036859141 | KEGG pathway |
| unidimensional cell growth | 0.043554587 | GO:0009826 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005191 | AT2G22420 (2.00E-146) | Peroxidase superfamily protein |
| CRO_T009096 | AT4G34490 (9.00E-173) | ATCAP1|cyclase associated protein 1 |
| CRO_T013470 | AT1G22210 (3.00E-109) | TPPC|trehalose-6-phosphate phosphatase C |
| CRO_T016259 | AT4G31140 (0) | O-Glycosyl hydrolases family 17 protein |
| CRO_T027263 | AT5G27395 (1.00E-89) | Mitochondrial inner membrane translocase complex, subunit Tim44-related protein |
| CRO_T028872 | AT1G73720 (1.00E-12) | SMU1|SUPPRESSORS OF MEC-8 AND UNC-52 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001476 | phosphatidylinositol metabolic process rRNA modification 3-phosphoinositide biosynthesis sesaminol glucoside biosynthesis box C/D snoRNP complex mitochondrial large ribosomal subunit small-subunit processome | details |
| TreatCFM001673 | Starch and sucrose metabolism adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc trehalose-phosphatase activity | details |
| TreatCFM001872 | spermine and spermidine degradation III hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc mRNA cap binding complex mRNA (guanine-N7-)-methyltransferase activity ribonuclease P activity trehalose-phosphatase activity RNA (guanine-N7)-methylation 7-methylguanosine mRNA capping protein lipoylation malate transmembrane transport malate transmembrane transporter activity trehalose biosynthetic process tRNA processing Transcription_related, Transcription factor: bHLH RNA phosphodiester bond hydrolysis, endonucleolytic | details |
| TreatCFM001932 | Noc1p-Noc2p complex Noc2p-Noc3p complex mRNA cap binding complex mRNA (guanine-N7-)-methyltransferase activity trehalose-phosphatase activity cytoskeleton organization RNA (guanine-N7)-methylation 7-methylguanosine mRNA capping ribosomal large subunit biogenesis trehalose biosynthetic process mitochondrion nucleoplasm unidimensional cell growth actin binding mRNA surveillance pathway Starch and sucrose metabolism peroxidase activity | details |
| TreatCFM001964 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: C2C2-Dof maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) metal ion transport ribosomal large subunit assembly cellular transition metal ion homeostasis | details |
Expression profiles
 Show details about module gene expression profiling |