TreatCFM002119's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| flavin biosynthesis I (bacteria and plants) | 0.003511979 | plantCyc |
| Insulin secretion | 0.004550155 | KEGG pathway |
| 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity | 0.007084392 | GO:0008425 |
| regulation of lipid metabolic process | 0.009121801 | GO:0019216 |
| Riboflavin metabolism | 0.009657941 | KEGG pathway |
| ubiquinone biosynthetic process | 0.010638328 | GO:0006744 |
| Ubiquinone and other terpenoid-quinone biosynthesis | 0.013234862 | KEGG pathway |
| extrinsic component of mitochondrial inner membrane | 0.014165016 | GO:0031314 |
| iron-sulfur cluster assembly | 0.024279556 | GO:0016226 |
| iron-sulfur cluster binding | 0.025907108 | GO:0051536 |
| transmembrane transporter activity | 0.025907108 | GO:0022857 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005905 | AT1G69520 (5.00E-06) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T011637 | AT1G73220 (6.00E-14) | AtOCT1|organic cation/carnitine transporter1 |
| CRO_T017820 | AT5G61210 (5.00E-96) | SNAP33|soluble N-ethylmaleimide-sensitive factor adaptor protein 33 |
| CRO_T024580 | AT4G01940 (6.00E-18) | NFU1|NFU domain protein 1 |
| CRO_T024821 | AT1G80240 (1.00E-132) | DGR1|DUF642 L-GalL responsive gene 1 |
| CRO_T026960 | AT2G20690 (2.00E-84) | lumazine-binding family protein |
| CRO_T029006 | AT3G58150 (2.00E-40) | Optic atrophy 3 protein (OPA3) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000176 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: ARF Transcription_related, Transcription factor: LOB Glycosylphosphatidylinositol(GPI)-anchor biosynthesis glucuronosyltransferase activity phosphomannomutase activity acyl-CoA hydrolysis GDP-glucose biosynthesis GDP-mannose biosynthesis glucose and glucose-1-phosphate degradation UDP-glucose biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) starch biosynthesis sucrose biosynthesis II acetylglucosaminyltransferase activity iron-sulfur cluster binding cutin biosynthesis sporopollenin precursors biosynthesis suberin monomers biosynthesis | details |
| TreatCFM001700 | Protein_kinases_phosphatases, PPC:2.1.3: CTR1/EDR1 Kinase pyrimidine nucleotide biosynthetic process 'de novo' pyrimidine nucleobase biosynthetic process nucleotide phosphorylation iron-sulfur cluster assembly acyl-CoA hydrolysis CMP phosphorylation pyrimidine deoxyribonucleotide phosphorylation UTP and CTP de novo biosynthesis cytidylate kinase activity uridylate kinase activity cutin biosynthesis pyrimidine ribonucleotides interconversion sporopollenin precursors biosynthesis suberin monomers biosynthesis Pyrimidine metabolism iron-sulfur cluster binding | details |
| TreatCFM001989 | Protein_kinases_phosphatases, PPC:2.1.3: CTR1/EDR1 Kinase CMP phosphorylation flavin biosynthesis I (bacteria and plants) pyrimidine deoxyribonucleotide phosphorylation UTP and CTP de novo biosynthesis pyrimidine nucleotide biosynthetic process nucleotide phosphorylation 'de novo' pyrimidine nucleobase biosynthetic process iron-sulfur cluster assembly cytidylate kinase activity uridylate kinase activity Riboflavin metabolism Pyrimidine metabolism pyrimidine ribonucleotides interconversion iron-sulfur cluster binding MAPK signaling pathway - plant transmembrane transporter activity | details |
Expression profiles
 Show details about module gene expression profiling |