TreatCFM002150's detailed annotation
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
Function Annotation | FDR | Gene Ontolog |
---|---|---|
formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.001161981 | cazy family |
hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.001161981 | cazy family |
Glycosaminoglycan degradation | 0.006378735 | KEGG pathway |
transferase activity, transferring alkyl or aryl (other than methyl) groups | 0.007971652 | GO:0016765 |
Terpenoid backbone biosynthesis | 0.01377981 | KEGG pathway |
transferase activity, transferring acyl groups | 0.014043769 | GO:0016746 |
vacuole | 0.048615471 | GO:0005773 |
Module member annotation
Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
---|---|---|
CRO_T007398 | AT1G04080 (2.00E-126) | PRP39|Tetratricopeptide repeat (TPR)-like superfamily protein |
CRO_T007416 | AT5G39600 (8.00E-53) | |
CRO_T018783 | AT2G17570 (7.00E-87) | cPT1|cis-prenyltransferase 1 |
CRO_T026162 | AT5G61400 (1.00E-51) | Pentatricopeptide repeat (PPR) superfamily protein |
CRO_T029649 | AT5G13690 (1.00E-120) | CYL1|CYCLOPS 1; NAGLU|N-ACETYL-GLUCOSAMINIDASE |
CRO_T033113 | AT5G02860 (1.00E-45) | Pentatricopeptide repeat (PPR) superfamily protein |
Direct connection functional modules
Module ID | Function Annotation | Overlap condition |
---|---|---|
TreatCFM001777 | Betalain biosynthesis intralumenal vesicle formation protein import into chloroplast stroma cellular aromatic compound metabolic process choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases oxidoreductase activity, acting on single donors with incorporation of molecular oxygen UDP-glycosyltransferase activity | details |
TreatCFM001880 | SRP-dependent cotranslational protein targeting to membrane transferase activity, transferring alkyl or aryl (other than methyl) groups protein tyrosine phosphatase activity cell division Protein export Terpenoid backbone biosynthesis | details |
TreatCFM002063 | L-arginine biosynthesis II (acetyl cycle) L-ornithine biosynthesis I acetyl-CoA:L-glutamate N-acetyltransferase activity Transcription_related, Transcription regulator: GNAT 2-Oxocarboxylic acid metabolism plastoglobule Endocytosis arginine biosynthetic process small GTPase mediated signal transduction | details |
TreatCFM002094 | lytic vacuole organization inosine catabolic process glycine decarboxylation via glycine cleavage system AP-3 adaptor complex glycine cleavage complex Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) inosine nucleosidase activity Golgi to vacuole transport regulation of intracellular pH adenine and adenosine salvage II glycine cleavage guanosine nucleotides degradation I pyrimidine ribonucleosides salvage II pyrimidine salvage pathway adenosine nucleotides degradation I folate transformations II photorespiration transferase activity, transferring alkyl or aryl (other than methyl) groups UDP-glucosyltransferase activity Lysosome Terpenoid backbone biosynthesis | details |
Expression profiles
Show details about module gene expression profiling |