PH01000160G0990's details annotation 1.Annotation ICBR annotation: expansin precursor, putative, expressed
Blast result AT3G03220 : 1.20E-96 Blast annotation: expansin A13 2.Location Scaffold: PH01000160 Strand: - Region | Start | End | gene | 769525 | 773082 | mRNA | 769525 | 773082 | exon | 769525 | 769946 | exon | 772262 | 772577 | exon | 772850 | 773082 | CDS | 769637 | 769946 | CDS | 772262 | 772577 | CDS | 772850 | 772997 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000957 | DDT Transcription_Regulator(from iTAK) CMGC_CDK-PITSLRE (from iTAK) HB-HD-ZIP Transcription_Regulator(from iTAK) HD-ZIP Transcription_Regulator(from PlantTFDB) plant-type cell wall organization, Ether_lipid_metabolism Endocytosis Glycerophospholipid_metabolism extracellular region,
| coexpression network | CFinderM001304 | nucleoside-triphosphatase activity, ATPase activity, coupled to transmembrane movement of substances, GT47 GlycosylTransferases RLK-Pelle_CR4L (from iTAK) ABC_transporters ATPase activity, ATP binding, nucleotide binding, SNF2 Transcription_Regulator(from iTAK)
| coexpression network | CFinderM001639 | intracellular_distribution_of_mitochondria plant-type cell wall organization, GT8 GlycosylTransferases extracellular region, SNF2 Transcription_Regulator(from iTAK)
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF03330.17 | DPBB_1 | 68 | 153 | PF01357.20 | Pollen_allerg_1 | 164 | 241 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0005576 | extracellular region | GO:0009664 | plant-type cell wall organization |
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