Gene details

Annotation of co-expression genes

PH01000306G1200's details annotation

1.Annotation

ICBR annotation: RNA-binding protein-like, putative, expressed

Blast result AT5G60980 : 4.20E-41
Blast annotation: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

2.Location

Scaffold: PH01000306
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001057	RLK-Pelle_URK-1 (from iTAK) NEK (from iTAK) chromatin silencing at telomere, chromatin modification, histone acetylation,
coexpression network	CFinderM001166	DNA_replication Nucleotide_excision_repair Mismatch_repair Riboflavin_metabolism histone acetylation, chromatin modification, chromatin silencing at telomere,
coexpression network	CFinderM001613	RNA_degradation
coexpression network	CFinderM001718	phosphoribosyl-AMP cyclohydrolase activity, histidine biosynthetic process, RNA modification, pseudouridine synthesis, nuclear pore,
coexpression network	CFinderM001831
coexpression network	CFinderM001848	Valine,_leucine_and_isoleucine_biosynthesis C5-Branched_dibasic_acid_metabolism SBP Transcription_Regulator(from PlantTFDB) Pantothenate_and_CoA_biosynthesis Butanoate_metabolism branched chain family amino acid biosynthetic process, acetolactate synthase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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