CFinderM001613's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RNA_degradation0.020270217KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000019G1410Tetratricopeptide repeat (TPR)-like superfamily proteinAT2G37230 (1.00E-171)
PH01000070G0070mitochondrial HSO70 2AT5G09590 (0.00E+00)
PH01000120G0370Pentatricopeptide repeat (PPR) superfamily proteinAT3G02490 (1.90E-92)
PH01000306G1200Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domainAT5G60980 (4.20E-41)
PH01000572G0830NB-ARC domain-containing disease resistance proteinAT3G14470 (1.40E-91)
PH01006750G0030-AT2G43110 (8.30E-36)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001057RLK-Pelle_URK-1 (from iTAK)
NEK (from iTAK)
chromatin silencing at telomere,
chromatin modification,
histone acetylation,
details
CFinderM001166DNA_replication
Nucleotide_excision_repair
Mismatch_repair
Riboflavin_metabolism
histone acetylation,
chromatin modification,
chromatin silencing at telomere,
details
CFinderM001718phosphoribosyl-AMP cyclohydrolase activity,
histidine biosynthetic process,
RNA modification,
pseudouridine synthesis,
nuclear pore,
details
CFinderM001831details
CFinderM001848Valine,_leucine_and_isoleucine_biosynthesis
C5-Branched_dibasic_acid_metabolism
SBP Transcription_Regulator(from PlantTFDB)
Pantothenate_and_CoA_biosynthesis
Butanoate_metabolism
branched chain family amino acid biosynthetic process,
acetolactate synthase activity,
details

4.Expression profilings